RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 MSH3P20585 1137 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 RPS3P23396 243 aaKnown RBP eCLIP21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 SIM2Q14190 667 aaPredicted RBP21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 CTSL3PQ5NE16 218 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 CNPY4Q8N129 248 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 GOLGA6L1Q8N7Z2 621 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 HEXDCQ8WVB3 486 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 DCUN1D1Q96GG9 259 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 ORAI3Q9BRQ5 295 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 PCDHB1Q9Y5F3 818 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 OAS3Q9Y6K5 1087 aaKnown RBP21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 PRSS21Q9Y6M0 314 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 FANCMQ8IYD8 2048 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 SPAG17Q6Q759 2223 aa21.49■■□□□ 1.03
VCPKMT-204ENST00000491402 FOXO6A8MYZ6 492 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ATP1B2P14415 290 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 TMEM115Q12893 351 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ZC3H14Q6PJT7 736 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 GCNT7Q6ZNI0 430 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 FUBP1Q96AE4 644 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ELMO2Q96JJ3 720 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 SERAC1Q96JX3 654 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 HSPA12BQ96MM6 686 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 AARSD1Q9BTE6 412 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 DUSP15Q9H1R2 295 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 KCNH6Q9H252 994 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 TRIM39Q9HCM9 518 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 PHPT1Q9NRX4 125 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 SLC39A10Q9ULF5 831 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 MYO15AQ9UKN7 3530 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ALDOAP04075 364 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 MYCLP1P12525 358 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 PKMP14618 531 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 PLK5Q496M5 336 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 TNFAIP8L3Q5GJ75 292 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 HECTD2Q5U5R9 776 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 PRR23BQ6ZRT6 265 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 SLC41A1Q8IVJ1 513 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ARL8AQ96BM9 186 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 PKNOX2Q96KN3 472 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 BMFQ96LC9 184 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 APOOQ9BUR5 198 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 ZCCHC2Q9C0B9 1178 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 CAB39LQ9H9S4 337 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 FAM86C1Q9NVL1 165 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 GNPTGQ9UJJ9 305 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 HCN4Q9Y3Q4 1203 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 COMMD10Q9Y6G5 202 aa21.48■■□□□ 1.03
VCPKMT-204ENST00000491402 SYF2O95926 243 aaKnown RBP21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 SAT1P21673 171 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 POU4F1Q01851 419 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 USP10Q14694 798 aaKnown RBP21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 LPAL2Q16609 132 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 PTRHD1Q6GMV3 140 aaKnown RBP21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 FAM45BPQ6NSW5 357 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 MACC1Q6ZN28 852 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 LPCAT2Q7L5N7 544 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 DET1Q7L5Y6 550 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 ADGRG6Q86SQ4 1221 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 C11orf74Q86VG3 221 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 FAM45AQ8TCE6 357 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 FOXJ1Q92949 421 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 OR2AG1Q9H205 316 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 ATXN10Q9UBB4 475 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 MED16Q9Y2X0 877 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 VWA7Q9Y334 891 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 HS3ST3A1Q9Y663 406 aa21.47■■□□□ 1.03
VCPKMT-204ENST00000491402 MEI4A8MW99 385 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 TPP1O14773 563 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 CD27P26842 260 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 ATP5DP30049 168 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 POLD2P49005 469 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 SERPINB8P50452 374 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 CDKN2DP55273 166 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 TAS2R39P59534 338 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 PFN3P60673 137 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 DNAJC3Q13217 504 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 ARMCX6Q7L4S7 300 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 TRABD2AQ86V40 505 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 RASGEF1AQ8N9B8 481 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 ISL2Q96A47 359 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 SGF29Q96ES7 293 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 OLFM1Q99784 485 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 STMN4Q9H169 189 aaPredicted RBP21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 IRF2BPLQ9H1B7 796 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 SLCO1B1Q9Y6L6 691 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 A0A1W2PPM1 405 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 IQCF5A8MTL0 148 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 SGTAO43765 313 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 VEGFDO43915 354 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 NIPSNAP2O75323 286 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 CDK14O94921 469 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 PMS2CLQ68D20 193 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 KYAT3Q6YP21 454 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 TIFABQ6ZNK6 161 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 ABI3BPQ7Z7G0 1075 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 CMC1Q7Z7K0 106 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 KCNJ9Q92806 393 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 ZC3H10Q96K80 434 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 SNX15Q9NRS6 342 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms