RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 MPP3Q13368 585 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 NOMO1Q15155 1222 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 PCSK7Q16549 785 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ATP13A5Q4VNC0 1218 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ODF2Q5BJF6 829 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF648Q5T619 568 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZDHHC20Q5W0Z9 365 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CCDC70Q6NSX1 233 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CCDC81Q6ZN84 652 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 PID1Q7Z2X4 250 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZFAND4Q86XD8 727 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 RCBTB1Q8NDN9 531 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 RBM41Q96IZ5 413 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC38A3Q99624 504 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 C19orf43Q9BQ61 176 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 TIMM29Q9BSF4 260 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 LACRTQ9GZZ8 138 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 OR2AG1Q9H205 316 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 PRDM8Q9NQV8 689 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 AKAP7Q9P0M2 348 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 TMEM9Q9P0T7 183 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SEPT10Q9P0V9 454 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF624Q9P2J8 865 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 CPNE7Q9UBL6 633 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 KCNK6Q9Y257 313 aa9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.59□□□□□ -0.87
TMEM39A-210ENST00000490099 TRBV23OR9-2A0A075B6M9 112 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 AGAP14A8MT82 685 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 KMOO15229 486 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 KCNJ13O60928 360 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 PPFIA2O75334 1257 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 CDK14O94921 469 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 PRB1P04280 392 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC2A4P14672 509 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF7P17097 686 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 WT1P19544 449 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 HLA-DPA1P20036 260 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 CA5AP35218 305 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC19A1P41440 591 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 MC2RQ01718 297 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 DMPKQ09013 629 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 C19orf57Q0VDD7 668 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 TMEM115Q12893 351 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SRSF6Q13247 344 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 TMEM164Q5U3C3 297 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ALS2CLQ60I27 953 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 KAZNQ674X7 775 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 RAD9BQ6WBX8 426 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC9B2Q86UD5 537 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 JAMLQ86YT9 394 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 PHYKPLQ8IUZ5 450 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 TMEM139Q8IV31 216 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 OR10G6Q8NH81 332 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 BRSK1Q8TDC3 778 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ALG3Q92685 438 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 NKD1Q969G9 470 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 PMEPA1Q969W9 287 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 HEMGNQ9BXL5 484 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ASPSCR1Q9BZE9 553 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ARNT2Q9HBZ2 717 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 ARFGAP3Q9NP61 516 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 FBXO8Q9NRD0 319 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SMOXQ9NWM0 555 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 DNMT3AQ9Y6K1 912 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SPTA1P02549 2419 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
TMEM39A-210ENST00000490099 MN1Q10571 1320 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 TLN1Q9Y490 2541 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 GCN1Q92616 2671 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 CCDC66A2RUB6 948 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 GRID2IPA4D2P6 1211 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SOWAHDA6NJG2 315 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 DUX1O43812 170 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 C9P02748 559 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 ITGB2P05107 769 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 ANKRD34CP0C6C1 535 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 RBL1P28749 1068 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 CSTF2P33240 577 aaKnown RBP eCLIP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 MAPK10P53779 464 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 BIRC2Q13490 618 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 CHRNA6Q15825 494 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 LINC00303Q3SY05 128 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 DENND5AQ6IQ26 1287 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 TMEM26Q6ZUK4 368 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms