RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NRP2O60462 931 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MRPS14O60783 128 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 KATNA1O75449 491 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 OR5F1O95221 314 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 PIGNO95427 931 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 VNN1O95497 513 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 HPRP00739 348 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MPOP05164 745 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 APOA4P06727 396 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 THBS1P07996 1170 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 RBP1P09455 135 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 THRBP10828 461 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 EPB42P16452 691 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGP20916 626 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 CBLP22681 906 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GTF2E2P29084 291 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 HTR7P34969 479 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ETV6P41212 452 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GARSP41250 739 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEA3P43357 314 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GYG1P46976 350 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GZMKP49863 264 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GPR85P60893 370 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 CCNA1P78396 465 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SCRN3Q0VDG4 424 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GALEQ14376 348 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 HADHQ16836 314 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TPRG1LQ5T0D9 272 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ZBTB37Q5TC79 503 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 NXNL2Q5VZ03 156 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 PM20D1Q6GTS8 502 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF517Q6ZMY9 492 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 GK5Q6ZS86 529 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 PRSS42Q7Z5A4 293 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 USP37Q86T82 979 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 LDHDQ86WU2 507 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 RFX6Q8HWS3 928 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SPPL2CQ8IUH8 684 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SYTL1Q8IYJ3 562 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TCTE3Q8IZS6 198 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 LRRC47Q8N1G4 583 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 PELI3Q8N2H9 469 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 PAF1Q8N7H5 531 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 C2orf69Q8N8R5 385 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TXNDC5Q8NBS9 432 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ST13P5Q8NFI4 369 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 RDH11Q8TC12 318 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SPATA18Q8TC71 538 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MCOLN3Q8TDD5 553 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 DNAJA4Q8WW22 397 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 KLHL6Q8WZ60 621 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 NKD1Q969G9 470 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MARC2Q969Z3 335 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ISL2Q96A47 359 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TESCQ96BS2 214 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TMCO6Q96DC7 493 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 RTP4Q96DX8 246 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ZHX1-C8orf76Q96EF9 292 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ASIC4Q96FT7 647 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TNIP3Q96KP6 325 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 B3GALT6Q96L58 329 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC32Q9BV29 185 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 IL22Q9GZX6 179 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM49AQ9H0Q0 323 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 OR51B5Q9H339 312 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SOX17Q9H6I2 414 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 KAT8Q9H7Z6 458 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM105AQ9NUU6 356 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 ASNSD1Q9NWL6 643 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 OXSMQ9NWU1 459 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC9A2Q9UBY0 812 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 FBXO40Q9UH90 709 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 RAPGEFL1Q9UHV5 662 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 KLHL21Q9UJP4 597 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TMPRSS11EQ9UL52 423 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TMCC3Q9ULS5 477 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MAFFQ9ULX9 164 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNH4Q9UQ05 1017 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TRAPPC4Q9Y296 219 aa4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 MTF2Q9Y483 593 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-206ENST00000489853 TAF1LQ8IZX4 1826 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 UBR2Q8IWV8 1755 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TRPM3Q9HCF6 1732 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 A0A0B4J203 849 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TCRBV5S1A1TA0A578 114 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 A8MV72 311 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 EFCAB9A8MZ26 197 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 STX7O15400 261 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ADAM11O75078 769 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MAFO75444 373 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SCO1O75880 301 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FGF18O76093 207 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SUPT7LO94864 414 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CALCAP01258 141 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FTH1P02794 183 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 RPS17P08708 135 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 HOXD4P09016 255 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms