RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 CTSCP53634 463 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 CFHR1Q03591 330 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 ZFP36L1Q07352 338 aaKnown RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 TMEM115Q12893 351 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 NFATC2Q13469 925 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 PEX6Q13608 980 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 SIX1Q15475 284 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 SEPT7Q16181 437 aaKnown RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 KCTD19Q17RG1 926 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 GPRC6AQ5T6X5 926 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 ZDHHC20Q5W0Z9 365 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 IYDQ6PHW0 289 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 LRRTM4Q86VH4 590 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 TRAPPC5Q8IUR0 188 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 SLITRK4Q8IW52 837 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 RASGEF1AQ8N9B8 481 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 DDHD1Q8NEL9 900 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 RTP4Q96DX8 246 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 NAF1Q96HR8 494 aaKnown RBP12.72□□□□□ -0.37
RPSA-208ENST00000487876 TLR10Q9BXR5 811 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 ARNT2Q9HBZ2 717 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
RPSA-208ENST00000487876 TMEM9Q9P0T7 183 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 PIKFYVEQ9Y2I7 2098 aa12.72□□□□□ -0.37
RPSA-208ENST00000487876 AHCTF1Q8WYP5 2266 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 IGHV1OR21-1A0A087WYE8 117 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PRR19A6NJB7 356 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 C2orf81A6NN90 581 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 LDB2O43679 373 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.37
RPSA-208ENST00000487876 TNFSF15O95150 251 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 CPNE6O95741 557 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 IFNB1P01574 187 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 HOXB3P14651 431 aaPredicted RBP12.71□□□□□ -0.37
RPSA-208ENST00000487876 ITIH1P19827 911 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 MPSTP25325 297 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 RPL10P27635 214 aaKnown RBP12.71□□□□□ -0.37
RPSA-208ENST00000487876 CXCR5P32302 372 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 GPR3P46089 330 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 FASLGP48023 281 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 XIAPP98170 497 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 HHEXQ03014 270 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 RAB11FIP2Q7L804 512 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 DTX3LQ8TDB6 740 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 BRSK1Q8TDC3 778 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 DNAJC1Q96KC8 554 aaKnown RBP12.71□□□□□ -0.37
RPSA-208ENST00000487876 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 SLC46A1Q96NT5 459 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PPP1R2P1Q96PQ5 205 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 TIMM29Q9BSF4 260 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 STRADBQ9C0K7 418 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 LRRC40Q9H9A6 602 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PCDHGA8Q9Y5G5 932 aa12.71□□□□□ -0.37
RPSA-208ENST00000487876 PRAMEF33A0A0G2JMD5 474 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 OR2AG2A6NM03 316 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 CDRT15L2A8MXV6 281 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 PLD2O14939 933 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 CRTAMO95727 393 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 AP2A1O95782 977 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 PRSS56P0CW18 603 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 BRAFP15056 766 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 RBMS1P29558 406 aaKnown RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 AKT1P31749 480 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 ETV5P41161 510 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 CLCNKAP51800 687 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 DRG2P55039 364 aaKnown RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 PCBP4P57723 403 aaKnown RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 ITGA9Q13797 1035 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 GTF2H3Q13889 308 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 SEPT6Q14141 434 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 POU6F1Q14863 301 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 C16orf72Q14CZ0 275 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 P3H1Q32P28 736 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 LDLRAP1Q5SW96 308 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 PIM3Q86V86 326 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 LSMEM2Q8N112 164 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 BEND7Q8N7W2 519 aaPredicted RBP12.7□□□□□ -0.38
RPSA-208ENST00000487876 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
RPSA-208ENST00000487876 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms