RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 PTPRCAPQ14761 206 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 CASP8Q14790 479 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 AGERQ15109 404 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 PTPRRQ15256 657 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 IRF4Q15306 451 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 TMED2Q15363 201 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 CDKN3Q16667 212 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 SYTL3Q4VX76 610 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 TMEM259Q4ZIN3 620 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 BEND6Q5SZJ8 279 aaPredicted RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 CEP85LQ5SZL2 805 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 HENMT1Q5T8I9 393 aaKnown RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 TEDDM1Q5T9Z0 273 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 FAM45BPQ6NSW5 357 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 FBXO38Q6PIJ6 1188 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 LRIG3Q6UXM1 1119 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 MARK2Q7KZI7 788 aaKnown RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 TECPR1Q7Z6L1 1165 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 SERPINA9Q86WD7 417 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 IGDCC3Q8IVU1 814 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 GPR150Q8NGU9 434 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 FAM45AQ8TCE6 357 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 SCAMP4Q969E2 229 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 GLYATL1Q969I3 302 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 FAM131CQ96AQ9 280 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 BIRC7Q96CA5 298 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 KLHDC7BQ96G42 594 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 ELMO2Q96JJ3 720 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 VPS35Q96QK1 796 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 SMIM14Q96QK8 99 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 PAFAH2Q99487 392 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 FAM96AQ9H5X1 160 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 C6orf106Q9H6K1 298 aaPredicted RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 SUDS3Q9H7L9 328 aaPredicted RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 RMI1Q9H9A7 625 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 VIPAS39Q9H9C1 493 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 UGT1A7Q9HAW7 530 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 UGT1A10Q9HAW8 530 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 UGT1A8Q9HAW9 530 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 TRIM39Q9HCM9 518 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 CD248Q9HCU0 757 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 ZDHHC3Q9NYG2 299 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 TAS2R13Q9NYV9 303 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 MOCS1Q9NZB8 636 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 NFKBIL1Q9UBC1 381 aaPredicted RBP6.89□□□□□ -1.31
UBR4-214ENST00000486515 FETUBQ9UGM5 382 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 RABGEF1Q9UJ41 708 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 ZNF180Q9UJW8 692 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 PCDHGA2Q9Y5H1 932 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 HS3ST3A1Q9Y663 406 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 CHD5Q8TDI0 1954 aa6.89□□□□□ -1.31
UBR4-214ENST00000486515 UBR5O95071 2799 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 MYLKQ15746 1914 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 KLHL33A6NCF5 533 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 OR51F1A6NGY5 319 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 FAM159BA6NKW6 160 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 H3BM21 787 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 ATP8B1O43520 1251 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 GDF9O60383 454 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 DNAJC6O75061 913 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 AP2A2O94973 939 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 TRIM16O95361 564 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 MT-ND3P03897 115 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 SNRPAP09012 282 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 GSTM1P09488 218 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 C7P10643 843 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 MYCLP1P12525 358 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 CTSEP14091 401 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 ATP1B2P14415 290 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 CD38P28907 300 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 TYK2P29597 1187 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 FMO4P31512 558 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 FOXN2P32314 431 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 SLC1A2P43004 574 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 SLCO1A2P46721 670 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 RGS4P49798 205 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 ARSDP51689 593 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 AFF3P51826 1226 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 KPNA2P52292 529 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 PPP2CBP62714 309 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 RACK1P63244 317 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 PPP2CAP67775 309 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 CDK3Q00526 305 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 CREB5Q02930 508 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 GSTM4Q03013 218 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 TMEM115Q12893 351 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 DNAJC3Q13217 504 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 CTBP1Q13363 440 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 MSLNQ13421 630 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 PDE1CQ14123 709 aaPredicted RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 USP10Q14694 798 aaKnown RBP6.88□□□□□ -1.31
UBR4-214ENST00000486515 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
UBR4-214ENST00000486515 ATP13A5Q4VNC0 1218 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms