RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AMPHP49418 695 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 TFF2Q03403 129 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 AP1B1Q10567 949 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 COASYQ13057 564 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 MVPQ14764 893 aaKnown RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 VWC2Q2TAL6 325 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 MYLK3Q32MK0 819 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 GLRA4Q5JXX5 417 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 TPRG1Q6ZUI0 275 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF595Q8IYB9 648 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 SLC44A5Q8NCS7 719 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ARRDC2Q8TBH0 407 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 EXOC4Q96A65 974 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ZFYVE19Q96K21 471 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 CABS1Q96KC9 395 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF558Q96NG5 402 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 MS4A10Q96PG2 267 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 PI4K2AQ9BTU6 479 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 EQTNQ9NQ60 294 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 PRMT7Q9NVM4 692 aaPredicted RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 CACNG4Q9UBN1 327 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 SLC9A2Q9UBY0 812 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 SLC24A2Q9UI40 661 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 LEF1Q9UJU2 399 aaPredicted RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 RCOR1Q9UKL0 485 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM184BQ9Y519 407 aaPredicted RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 RAI2Q9Y5P3 530 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 WDR17Q8IZU2 1322 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 A0A1W2PPM1 405 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 IFIT3O14879 490 aaKnown RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 MDM4O15151 490 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 TLX3O43711 291 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 CTSAP10619 480 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 PDGFRAP16234 1089 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ADRA2CP18825 462 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 PSMA3P25788 255 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 LIMK1P53667 647 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 GHRHRQ02643 423 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 GAD2Q05329 585 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 RBPJQ06330 500 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ACSM1Q08AH1 577 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 SLC10A2Q12908 348 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 HSPB3Q12988 150 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 MAD2L1Q13257 205 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 LAMB3Q13751 1172 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 PKN2Q16513 984 aaKnown RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 EIF2S3LQ2VIR3 472 aaKnown RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD20A4Q4UJ75 823 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD20A8PQ5CZ79 823 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 PPP6R3Q5H9R7 873 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD20A2Q5SQ80 823 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 C6orf136Q5SQH8 315 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD20A1Q5TYW2 823 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD20A3Q5VUR7 823 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 NSUN5P2Q63ZY6 315 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 FRG2Q64ET8 278 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 TATDN1Q6P1N9 297 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ALKBH5Q6P6C2 394 aaKnown RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 MOXD1Q6UVY6 613 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 DEF8Q6ZN54 512 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ABI3BPQ7Z7G0 1075 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 GPSM1Q86YR5 675 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 C9orf106Q8NAJ2 232 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 CTCFLQ8NI51 663 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 GPT2Q8TD30 523 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ROBO4Q8WZ75 1007 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 INTS14Q96SY0 518 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 WDR77Q9BQA1 342 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 IL1RAPL2Q9NP60 686 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 MMP25Q9NPA2 562 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 NRIP3Q9NQ35 241 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 ABCB8Q9NUT2 735 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 CDH7Q9ULB5 785 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 TTC7AQ9ULT0 858 aaPredicted RBP4.47□□□□□ -1.69
VPS13A-211ENST00000484581 SQORQ9Y6N5 450 aa4.47□□□□□ -1.69
VPS13A-211ENST00000484581 A0A0B4J293 547 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 A6NNC1 897 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 ZNF263O14978 683 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 NDUFS4O43181 175 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 TOMM70O94826 608 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 EGFP01133 1207 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 KLKB1P03952 638 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 GBAP04062 536 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 HLA-DPA1P20036 260 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 NMBRP28336 390 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 EIF2S3P41091 472 aaKnown RBP4.46□□□□□ -1.7
VPS13A-211ENST00000484581 FASLGP48023 281 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 NAGLUP54802 743 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 BPIFB3P59826 476 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 PPP2R2BQ00005 443 aa4.46□□□□□ -1.7
VPS13A-211ENST00000484581 SMC1AQ14683 1233 aaKnown RBP4.46□□□□□ -1.7
VPS13A-211ENST00000484581 MEP1AQ16819 746 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms