RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SIRPB2Q5JXA9 342 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 DENND5AQ6IQ26 1287 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RETSATQ6NUM9 610 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SH2D5Q6ZV89 423 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 USP30Q70CQ3 517 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RAPH1Q70E73 1250 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 LCA5Q86VQ0 697 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ZSWIM9Q86XI8 627 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 GATAD2AQ86YP4 633 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 NUDCD3Q8IVD9 361 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 LMNTD2Q8IXW0 634 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 GBP7Q8N8V2 638 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 CADM4Q8NFZ8 388 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 OR2T34Q8NGX1 318 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ARRDC2Q8TBH0 407 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 DNASE2BQ8WZ79 361 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 KLHL32Q96NJ5 620 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SMIM14Q96QK8 99 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RTKNQ9BST9 563 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ADGRE3Q9BY15 652 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RHOJQ9H4E5 214 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 GAREM1Q9H706 876 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 FBRSQ9HAH7 460 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SGK2Q9HBY8 427 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 AASDHPPTQ9NRN7 309 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SLC17A7Q9P2U7 560 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 TLK1Q9UKI8 766 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 FZD4Q9ULV1 537 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ZFR2Q9UPR6 939 aaKnown RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CHD8Q9HCK8 2581 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1W2PPC4 97 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC78A2IDD5 438 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 LRRC72A6NJI9 287 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 KLF11O14901 512 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 PFDN6O15212 129 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 RAD51BO15315 384 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SH3BP5O60239 455 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SDC3O75056 442 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 KCNK5O95279 499 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CRTAMO95727 393 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 APOA4P06727 396 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 MMP2P08253 660 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ADRB3P13945 408 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CD59P13987 128 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 GNSP15586 552 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CD27P26842 260 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 FOXN2P32314 431 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ETV4P43268 484 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CD151P48509 253 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 KPNA2P52292 529 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 LIMK1P53667 647 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CLDN6P56747 220 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TMPRSS15P98073 1019 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 NSUN2Q08J23 767 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TCEA2Q15560 299 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SMAD1Q15797 465 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CNGA3Q16281 694 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 HLA-BQ31612 363 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TPRG1LQ5T0D9 272 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TSTD2Q5T7W7 516 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 N4BP2L1Q5TBK1 243 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 DESI1Q6ICB0 168 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 NEPROQ6NW34 567 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ESRP1Q6NXG1 681 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 FAM47EQ6ZV65 393 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SRLQ86TD4 932 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 MARCH9Q86YJ5 346 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 CNTN4Q8IWV2 1026 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 PGBD5Q8N414 524 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 PCDH20Q8N6Y1 951 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 PAF1Q8N7H5 531 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 OR2AP1Q8NGE2 309 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 BRSK1Q8TDC3 778 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 BLOC1S5Q8TDH9 187 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ISL2Q96A47 359 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 FAM131CQ96AQ9 280 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TADA1Q96BN2 335 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ATXN7L3BQ96GX2 97 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 VPS39Q96JC1 886 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 NUDCD1Q96RS6 583 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 AGAP2Q99490 1192 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 HEPHQ9BQS7 1158 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 WRAP53Q9BUR4 548 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TSSK1BQ9BXA7 367 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 ACTR5Q9H9F9 607 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SNX15Q9NRS6 342 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 TREX1Q9NSU2 369 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 IL1RAPL1Q9NZN1 696 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 SLC17A6Q9P2U8 582 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 COQ6Q9Y2Z9 468 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms