RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ARGFXA6NJG6 315 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 ANKRD66B4E2M5 251 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 C21orf140B9A014 251 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 MTX2O75431 263 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 CEACAM4O75871 244 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 RASSF9O75901 435 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 VIPP01282 170 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 HLA-DQB2P05538 268 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 GZMAP12544 262 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 AMD1P17707 334 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 POU3F2P20265 443 aaPredicted RBP12.66□□□□□ -0.38
UBR4-213ENST00000483922 PTPN4P29074 926 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 CA5AP35218 305 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 ARL4AP40617 200 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 CAPZBP47756 277 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 EPHB1P54762 984 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 DRG2P55039 364 aaKnown RBP12.66□□□□□ -0.38
UBR4-213ENST00000483922 GALNT2Q10471 571 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 SLC10A2Q12908 348 aaPredicted RBP12.66□□□□□ -0.38
UBR4-213ENST00000483922 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 JMJD6Q6NYC1 403 aaPredicted RBP12.66□□□□□ -0.38
UBR4-213ENST00000483922 CRTC3Q6UUV7 619 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 PPP1R3BQ86XI6 285 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 CNTD1Q8N815 330 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 SLC41A2Q96JW4 573 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 SLC25A23Q9BV35 468 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 ING2Q9H160 280 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 OSGEPL1Q9H4B0 414 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 PCDH9Q9HC56 1237 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 MYO1AQ9UBC5 1043 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 DNAJC16Q9Y2G8 782 aa12.66□□□□□ -0.38
UBR4-213ENST00000483922 PCDHGA9Q9Y5G4 932 aaKnown RBP12.66□□□□□ -0.38
UBR4-213ENST00000483922 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ESPL1Q14674 2120 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 LRRC53A6NM62 1247 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ENO4A6NNW6 628 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 KRT86O43790 486 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 EBLN1P0CF75 366 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 SLC2A4P14672 509 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ZNF7P17097 686 aaPredicted RBP12.65□□□□□ -0.38
UBR4-213ENST00000483922 DESP17661 470 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 CASP14P31944 242 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 PAFAH1B3Q15102 231 aaKnown RBP12.65□□□□□ -0.38
UBR4-213ENST00000483922 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
UBR4-213ENST00000483922 ANKRD20A8PQ5CZ79 823 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 PRAMEF17Q5VTA0 474 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
UBR4-213ENST00000483922 PHYKPLQ8IUZ5 450 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
UBR4-213ENST00000483922 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ZNF653Q96CK0 615 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 TSGA13Q96PP4 275 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 RAB33BQ9H082 229 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 FBN2P35556 2912 aa12.65□□□□□ -0.38
UBR4-213ENST00000483922 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 SLC25A14O95258 325 aaPredicted RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 LDLRP01130 860 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 MT-ND3P03897 115 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 CAPN1P07384 714 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 PIRTP0C851 137 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 SKILP12757 684 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 PTGIRP43119 386 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 ZNF165P49910 485 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 PGDP52209 483 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 ITGA1P56199 1179 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 RPL26P61254 145 aaKnown RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 IRGCQ6NXR0 463 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 TMC3Q7Z5M5 1100 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 GPR150Q8NGU9 434 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 TEKT4Q8WW24 435 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 THAP4Q8WY91 577 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 GLYATL1Q969I3 302 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 RANBP9Q96S59 729 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 MAP3K3Q99759 626 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 MLPHQ9BV36 600 aaPredicted RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 SPATA16Q9BXB7 569 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 GPR87Q9BY21 358 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
UBR4-213ENST00000483922 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 FARSAQ9Y285 508 aaKnown RBP12.64□□□□□ -0.39
UBR4-213ENST00000483922 AURKAO14965 403 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 CBX6O95503 412 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 DDAH2O95865 285 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 LPOP22079 712 aaPredicted RBP12.63□□□□□ -0.39
UBR4-213ENST00000483922 CES1P23141 567 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 CCNCP24863 283 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 SERPINB6P35237 376 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms