RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 NAF1Q96HR8 494 aaKnown RBP11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 PLEKHG4BQ96PX9 1271 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 GFM1Q96RP9 751 aaKnown RBP11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRABDQ9H4I3 376 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 EPB41L5Q9HCM4 733 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 ASCL3Q9NQ33 180 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 WDR37Q9Y2I8 494 aa11.25□□□□□ -0.61
RAPGEF1-207ENST00000481260 ATMQ13315 3056 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 OR51F1A6NGY5 319 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 RHPN2P1A8MT19 583 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 STX7O15400 261 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 NUDT21O43809 227 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 CEP104O60308 925 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 STK10O94804 968 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 CDK14O94921 469 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PRAMEF1O95521 474 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 AP2A1O95782 977 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 ITIH1P19827 911 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 LPOP22079 712 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 RPL10P27635 214 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PBLDP30039 288 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 EIF2S3P41091 472 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 ETV5P41161 510 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 TMEM115Q12893 351 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PRPSAP1Q14558 356 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 C16orf72Q14CZ0 275 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 TTC27Q6P3X3 843 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 IYDQ6PHW0 289 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLITRK4Q8IW52 837 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PRELID2Q8N945 189 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 RCBTB1Q8NDN9 531 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF398Q8TD17 642 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 RNF31Q96EP0 1072 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 VPS35Q96QK1 796 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 NRTNQ99748 197 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 TBC1D10AQ9BXI6 508 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF624Q9P2J8 865 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 DKK4Q9UBT3 224 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLC2A6Q9UGQ3 507 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PYCARDQ9ULZ3 195 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF148Q9UQR1 794 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 AAR2Q9Y312 384 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 UNC13CQ8NB66 2214 aa11.24□□□□□ -0.61
RAPGEF1-207ENST00000481260 IGHV1OR21-1A0A087WYE8 117 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 OR52A4PA6NMU1 304 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SRP72O76094 671 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF7P17097 686 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZFP36L1Q07352 338 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SRSF6Q13247 344 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SEPT6Q14141 434 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 NR1D2Q14995 579 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 CLCA4Q14CN2 919 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRIP13Q15645 432 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 COL28A1Q2UY09 1125 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRAPPC5Q8IUR0 188 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 PIANPQ8IYJ0 282 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLC35F6Q8N357 371 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 DDHD1Q8NEL9 900 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 COG1Q8WTW3 980 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SGF29Q96ES7 293 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF778Q96MU6 729 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ALS2CR12Q96Q35 445 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 POLR1BQ9H9Y6 1135 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ARNT2Q9HBZ2 717 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 RAD18Q9NS91 495 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 HACD3Q9P035 362 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLC30A1Q9Y6M5 507 aa11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZFC3H1O60293 1989 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-207ENST00000481260 IGHV5-10-1A0A0J9YXX1 117 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF185O15231 689 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TCEA3O75764 348 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 POP7O75817 140 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TNFSF15O95150 251 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 CCL4P13236 92 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 MC4RP32245 332 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLC19A1P41440 591 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 MAPK9P45984 424 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 LSSP48449 732 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 INHBCP55103 352 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 CRADDP78560 199 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms