RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PRKAR1AP10644 381 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 PTPN3P26045 913 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 CSRP3P50461 194 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 POLE2P56282 527 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 NOMO1Q15155 1222 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 SLC14A2Q15849 920 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 TEX44Q53QW1 395 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 LRRC38Q5VT99 294 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 PDPK2PQ6A1A2 396 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 CCDC70Q6NSX1 233 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 TMEM26Q6ZUK4 368 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 LRRTM4Q86VH4 590 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 ZNF547Q8IVP9 402 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 TRIM48Q8IWZ4 208 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 RHOT2Q8IXI1 618 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 KIAA1143Q96AT1 154 aaPredicted RBP18.55■□□□□ 0.56
ABCF3-214ENST00000480562 SLC45A3Q96JT2 553 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 TGM7Q96PF1 710 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 ZPBPQ9BS86 351 aa18.55■□□□□ 0.56
ABCF3-214ENST00000480562 SIDT1Q9NXL6 827 aaKnown RBP18.55■□□□□ 0.56
ABCF3-214ENST00000480562 A0A0A6YYK5 440 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 CAPN5O15484 640 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 UBXN7O94888 489 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 CDK14O94921 469 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 RPL10P27635 214 aaKnown RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 CD68P34810 354 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 CCR10P46092 362 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 KCNAB2Q13303 367 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 PRKD1Q15139 912 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 ATP13A5Q4VNC0 1218 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 PTRH1Q86Y79 214 aaKnown RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 RHOT1Q8IXI2 618 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 C9orf72Q96LT7 481 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 TEKT5Q96M29 485 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 TIMM29Q9BSF4 260 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 ADNPQ9H2P0 1102 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 UCK1Q9HA47 277 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 DDX56Q9NY93 547 aaKnown RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 TRIM10Q9UDY6 481 aa18.54■□□□□ 0.56
ABCF3-214ENST00000480562 TMEM184BQ9Y519 407 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-214ENST00000480562 PRR19A6NJB7 356 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 OR52A4PA6NMU1 304 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 F5H423 210 aaPredicted RBP18.53■□□□□ 0.56
ABCF3-214ENST00000480562 VEGFDO43915 354 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 MFAP3LO75121 409 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 DLGAP3O95886 979 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 C9P02748 559 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 ANKRD34CP0C6C1 535 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 BRAFP15056 766 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 PECAM1P16284 738 aaPredicted RBP18.53■□□□□ 0.56
ABCF3-214ENST00000480562 AMD1P17707 334 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 COMTP21964 271 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 LEPRP48357 1165 aaKnown RBP18.53■□□□□ 0.56
ABCF3-214ENST00000480562 SEPHS1P49903 392 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 DRG2P55039 364 aaKnown RBP18.53■□□□□ 0.56
ABCF3-214ENST00000480562 FOXM1Q08050 763 aa18.53■□□□□ 0.56
ABCF3-214ENST00000480562 HECTD1Q9ULT8 2610 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 SPOPO43791 374 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 CST8O60676 142 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 TPM1P09493 284 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 ZNF28P17035 718 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 NFKB1P19838 968 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 CDKN2BP42772 138 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 SLC1A1P43005 524 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 WNT3AP56704 352 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 SH3BP2P78314 561 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 ABHD18Q0P651 414 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 WASHC5Q12768 1159 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 KAZNQ674X7 775 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 KDELC1Q6UW63 502 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 ABRAXAS1Q6UWZ7 409 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 TRAPPC5Q8IUR0 188 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 SLC25A41Q8N5S1 370 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 GDAP1Q8TB36 358 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 TFB1MQ8WVM0 346 aaKnown RBP18.52■□□□□ 0.56
ABCF3-214ENST00000480562 RSC1A1Q92681 617 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 CATSPER2Q96P56 530 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 VPS35Q96QK1 796 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 SRPK1Q96SB4 655 aaKnown RBP18.52■□□□□ 0.56
ABCF3-214ENST00000480562 FAM153AQ9UHL3 310 aa18.52■□□□□ 0.56
ABCF3-214ENST00000480562 KIF1CO43896 1103 aaKnown RBP18.51■□□□□ 0.55
ABCF3-214ENST00000480562 RASSF9O75901 435 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 IDSP22304 550 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 OAS2P29728 719 aaKnown RBP18.51■□□□□ 0.55
ABCF3-214ENST00000480562 CHRNA4P43681 627 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 NR2C2P49116 596 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 ADCY2Q08462 1091 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 CDC20Q12834 499 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 TMEM115Q12893 351 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-214ENST00000480562 TFDP2Q14188 446 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 GPR18Q14330 331 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 TAZQ16635 292 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 SIRPB2Q5JXA9 342 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 ATP1A1-AS1Q5TC04 95 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 C16orf46Q6P387 395 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 C11orf96Q7Z7L8 435 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 TTC30BQ8N4P2 665 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 STARD8Q92502 1023 aa18.51■□□□□ 0.55
ABCF3-214ENST00000480562 CXorf40BQ96DE9 158 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms