RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 FAM234BA2RU67 622 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 H3BMM5 538 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 H3BMQ9 156 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 STX16O14662 325 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 PFDN6O15212 129 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 PIP5K1CO60331 668 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 KPNA6O60684 536 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 CBFA2T3O75081 653 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ZNF623O75123 536 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 NDUFS3O75489 264 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 GMNNO75496 209 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ESRRBO95718 433 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 SERPINF2P08697 491 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 NCK1P16333 377 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 CA8P35219 290 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 HLCSP50747 726 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 YBEYP58557 167 aaPredicted RBP8.62□□□□□ -1.03
PKP4-210ENST00000480171 ERVK-8P63133 956 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 TIAL1Q01085 375 aaKnown RBP eCLIP8.62□□□□□ -1.03
PKP4-210ENST00000480171 RBBP7Q16576 425 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 TYSND1Q2T9J0 566 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ALFQ53S48 1182 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ACBD5Q5T8D3 534 aaPredicted RBP8.62□□□□□ -1.03
PKP4-210ENST00000480171 FAM219BQ5XKK7 198 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ERAP2Q6P179 960 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 PRR23BQ6ZRT6 265 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 ZNF683Q8IZ20 524 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 OFCC1Q8IZS5 231 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 OR56A4Q8NGH8 313 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 SH3RF2Q8TEC5 729 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 VPS33AQ96AX1 596 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 BIRC7Q96CA5 298 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 COG8Q96MW5 612 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 DOK1Q99704 481 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 SLC52A3Q9NQ40 469 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 MAGEL2Q9UJ55 1249 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 PATJQ8NI35 1801 aa8.62□□□□□ -1.03
PKP4-210ENST00000480171 DEAF1O75398 565 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 ECI2O75521 394 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RPS17P08708 135 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 PRR35P0CG20 571 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 IMPDH2P12268 514 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 FMO4P31512 558 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 EFEMP1Q12805 493 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 SERINC3Q13530 473 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 SEMA3AQ14563 771 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 ZNF829Q3KNS6 432 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 SLC39A12Q504Y0 691 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 CYBRD1Q53TN4 286 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 PAQR3Q6TCH7 311 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 CCBE1Q6UXH8 406 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 Q6ZNX1 250 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RBM12BQ8IXT5 1001 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 PGBD5Q8N414 524 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 OR13C4Q8NGS5 318 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RNF145Q96MT1 663 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RPRD1AQ96P16 312 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 SEPHS2Q99611 448 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 HGH1Q9BTY7 390 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 BRINP2Q9C0B6 783 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 PAIP1Q9H074 479 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 ABI2Q9NYB9 513 aaPredicted RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 TIMM22Q9Y584 194 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 DNAH12Q6ZR08 3092 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 IGLV3-10A0A075B6K4 115 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 SYNCRIPO60506 623 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 TULP3O75386 442 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 VPS26AO75436 327 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 ATE1O95260 518 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 NDST3O95803 873 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 CLIC3O95833 236 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RPLP2P05387 115 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 CDH1P12830 882 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 EEF1B2P24534 225 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 UFM1P61960 85 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 ADARB1P78563 741 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 ECT2LQ008S8 904 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 EMX2Q04743 252 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 GALNT3Q14435 633 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 IHHQ14623 411 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 PTPRCAPQ14761 206 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 TSNQ15631 228 aaKnown RBP8.61□□□□□ -1.03
PKP4-210ENST00000480171 PAGE3Q5JUK9 113 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 MORN1Q5T089 497 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 NANOGP8Q6NSW7 305 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 FBXL22Q6P050 247 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 AFTPHQ6ULP2 937 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 CD300LGQ6UXG3 332 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 GPRIN3Q6ZVF9 776 aa8.61□□□□□ -1.03
PKP4-210ENST00000480171 HID1Q8IV36 788 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms