RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 SNX20Q7Z614 316 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 DSG4Q86SJ6 1040 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 SERPINA9Q86WD7 417 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 C10orf107Q8IVU9 208 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CENPLQ8N0S6 344 aaPredicted RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CCDC197Q8NCU1 140 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 RAB3IL1Q8TBN0 382 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 PIP4K2CQ8TBX8 421 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 RDH11Q8TC12 318 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 HEXDCQ8WVB3 486 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 NXNL1Q96CM4 212 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 SEC16BQ96JE7 1060 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 GPR78Q96P69 363 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 P2RY13Q9BPV8 354 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 MECRQ9BV79 373 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 TSSK1BQ9BXA7 367 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 TMEM245Q9H330 911 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 ASB8Q9H765 288 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 POPDC3Q9HBV1 291 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 FBRSL1Q9HCM7 1045 aaKnown RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 SLCO1B3Q9NPD5 702 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 RAD18Q9NS91 495 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 TAS2R13Q9NYV9 303 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 PKD2L2Q9NZM6 624 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CPSF2Q9P2I0 782 aaKnown RBP6.08□□□□□ -1.44
LRRC47-203ENST00000479239 COPG2Q9UBF2 871 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CRLS1Q9UJA2 301 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 PPM1HQ9ULR3 514 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 STARD13Q9Y3M8 1113 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 COMMD10Q9Y6G5 202 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 STON1Q9Y6Q2 735 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CHD6Q8TD26 2715 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
LRRC47-203ENST00000479239 RGSL1A5PLK6 1076 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 C1QTNF3-AMACRE9PGA6 284 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 G3V2L1 256 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PRMT5O14744 637 aaPredicted RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 NPC1O15118 1278 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 GPR39O43194 453 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SNX3O60493 162 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ZIC2O95409 532 aaPredicted RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PDGFAP04085 211 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SERPINE1P05121 402 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PYGLP06737 847 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 EPHX1P07099 455 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 RBP1P09455 135 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 C1SP09871 688 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 TROVE2P10155 538 aaKnown RBP eCLIP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 RALBP11234 206 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ZNF30P17039 623 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 CHRM3P20309 590 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 GRK2P25098 689 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ITGB7P26010 798 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SKIV2L2P42285 1042 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 IL12RB1P42701 662 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 WASP42768 502 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SPINT3P49223 89 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SUOXP51687 545 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 TIAL1Q01085 375 aaKnown RBP eCLIP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 BST1Q10588 318 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ASPHQ12797 758 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SMAD4Q13485 552 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ITIH4Q14624 930 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PCLAFQ15004 111 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ACAP2Q15057 778 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 FAM46CQ5VWP2 391 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 EGFLAMQ63HQ2 1017 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PTRHD1Q6GMV3 140 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SDE2Q6IQ49 451 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 LRRC8EQ6NSJ5 796 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 FBXL19Q6PCT2 694 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PAQR3Q6TCH7 311 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ZYG11AQ6WRX3 759 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PARS2Q7L3T8 475 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 OTOAQ7RTW8 1153 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 DGLUCYQ7Z3D6 616 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PIM3Q86V86 326 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 MMAAQ8IVH4 418 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 RBFAQ8N0V3 343 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 NXPE1Q8N323 547 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 FSTL5Q8N475 847 aaPredicted RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ANKS4BQ8N8V4 417 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 GPR26Q8NDV2 337 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ANKRD49Q8WVL7 239 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ARRDC3Q96B67 414 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 FAM136AQ96C01 138 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ERLEC1Q96DZ1 483 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PPP1R16AQ96I34 528 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 UBXN10Q96LJ8 280 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 BIRC8Q96P09 236 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 PLEKHG4BQ96PX9 1271 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 ACOX2Q99424 681 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 UNKQ9C0B0 810 aaKnown RBP6.07□□□□□ -1.44
LRRC47-203ENST00000479239 CLPBQ9H078 707 aa6.07□□□□□ -1.44
LRRC47-203ENST00000479239 P2RY12Q9H244 342 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms