RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CDADC1Q9BWV3 514 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 AKTIPQ9H8T0 292 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 PCDH10Q9P2E7 1040 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 AGO1Q9UL18 857 aaKnown RBP21.06■□□□□ 0.96
SDF4-206ENST00000478938 OAS3Q9Y6K5 1087 aaKnown RBP21.06■□□□□ 0.96
SDF4-206ENST00000478938 UBXN8O00124 270 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 AKR7A2O43488 359 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 PRSS23O95084 383 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 HPRP00739 348 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 PRLP01236 227 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 EDN1P05305 212 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 PRKACGP22612 351 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 CASP2P42575 452 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 SLC15A1P46059 708 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 FCGRTP55899 365 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 IL1RL1Q01638 556 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 DSC3Q14574 896 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 FAM83EQ2M2I3 478 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 ZNF699Q32M78 642 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 C5orf22Q49AR2 442 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 GPAT3Q53EU6 434 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 EFL1Q7Z2Z2 1120 aaKnown RBP21.06■□□□□ 0.96
SDF4-206ENST00000478938 AMIGO1Q86WK6 493 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 RIOX2Q8IUF8 465 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 SLC7A6Q92536 515 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 TWNKQ96RR1 684 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 FBXO40Q9UH90 709 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 GRIP1Q9Y3R0 1128 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 HS6ST1O60243 411 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 CYP2A6P11509 494 aaPredicted RBP21.05■□□□□ 0.96
SDF4-206ENST00000478938 ATP4BP51164 291 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 ATXN1P54253 815 aaKnown RBP21.05■□□□□ 0.96
SDF4-206ENST00000478938 TGFB2P61812 414 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 GHRHRQ02643 423 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 MTMR1Q13613 665 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 TMEM130Q8N3G9 435 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 DNAAF3Q8N9W5 541 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 AP3M1Q9Y2T2 418 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 STYXL1Q9Y6J8 313 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 LINC00854A0A1B0GVQ3 168 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 UBFD1O14562 309 aaKnown RBP21.05■□□□□ 0.96
SDF4-206ENST00000478938 CNTN5O94779 1100 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 RAPSNQ13702 412 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 EFR3AQ14156 821 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 DENND5AQ6IQ26 1287 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 MFSD6LQ8IWD5 586 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 HEXDCQ8WVB3 486 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 SEPT1Q8WYJ6 367 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 C19orf60Q96EN9 201 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 APOL2Q9BQE5 337 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 ACOT13Q9NPJ3 140 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 DIABLOQ9NR28 239 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 TMEM39AQ9NV64 488 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 SLAMF8Q9P0V8 285 aa21.05■□□□□ 0.96
SDF4-206ENST00000478938 SLC12A8A0AV02 714 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 DDTLA6NHG4 134 aaPredicted RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 CFL1P23528 166 aaKnown RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 ATP5F1P24539 256 aaPredicted RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 MAP3K7CLP57077 242 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 GRB7Q14451 532 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 IRF3Q14653 427 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 NCBP2-AS2Q69YL0 99 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 SPESP1Q6UW49 350 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 OR8H2Q8N162 312 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 PJA1Q8NG27 643 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 OR4M2Q8NGB6 313 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 ZFAND1Q8TCF1 268 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 GIMAP1Q8WWP7 306 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 DEDD2Q8WXF8 326 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 PHF21BQ96EK2 531 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 P2RY11Q96G91 374 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 TOE1Q96GM8 510 aaKnown RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 REXO5Q96IC2 774 aaKnown RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 NSMCE2Q96MF7 247 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 TM9SF2Q99805 663 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 MUC13Q9H3R2 512 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 RNF167Q9H6Y7 350 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 OR6C70A6NIJ9 312 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 SLC9A3R1O14745 358 aaPredicted RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 AIREO43918 545 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 POU3F3P20264 500 aaPredicted RBP21.04■□□□□ 0.96
SDF4-206ENST00000478938 RFX2P48378 723 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 SLC35A2P78381 396 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 SULT1C3Q6IMI6 304 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 CACTIN-AS1Q8N1I8 211 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 MIER2Q8N344 545 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 FAM86B1Q8N7N1 296 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 LPAR1Q92633 364 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 OR2A14Q96R47 310 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 TRIM54Q9BYV2 358 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 MMP28Q9H239 520 aa21.04■□□□□ 0.96
SDF4-206ENST00000478938 KCNJ13O60928 360 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 FTH1P02794 183 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 TPH1P17752 444 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 GRAPQ13588 217 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 GJC2Q5T442 439 aaPredicted RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 STYK1Q6J9G0 422 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 BNIPLQ7Z465 357 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 RNF135Q8IUD6 432 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 GRAPLQ8TC17 118 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms