RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CYGBQ8WWM9 190 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 SEPHS2Q99611 448 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 DCUN1D5Q9BTE7 237 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 BOCQ9BWV1 1114 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 TM6SF2Q9BZW4 377 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 ABCG8Q9H221 673 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 EPB41L1Q9H4G0 881 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 CD274Q9NZQ7 290 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 OAZ3Q9UMX2 235 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 PCDHB9Q9Y5E1 797 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 OAS3Q9Y6K5 1087 aaKnown RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 USP34Q70CQ2 3546 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 RNF103-CHMP3A0A140T963 221 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 ANKRD33BA6NCL7 494 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 C2orf81A6NN90 581 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 ARPC2O15144 300 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 TMCC1O94876 653 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 GUCA1CO95843 209 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CYBBP04839 570 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 RPS17P08708 135 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 CDK4P11802 303 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 PKMP14618 531 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 LPOP22079 712 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 HSPA13P48723 471 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 SLC11A2P49281 568 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 NR1H2P55055 460 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CDH4P55283 916 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 ZXDBP98169 803 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CREB5Q02930 508 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 ZNF177Q13360 481 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 PLD1Q13393 1074 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 NHSL2Q5HYW2 709 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 LETMD1Q6P1Q0 360 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 SLC2A7Q6PXP3 512 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 AFTPHQ6ULP2 937 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CARNMT1Q8N4J0 409 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 RNF217Q8TC41 542 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CD99L2Q8TCZ2 262 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 RMND5BQ96G75 393 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 ZNF599Q96NL3 588 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.7
VPS52-217ENST00000478934 SYTL2Q9HCH5 934 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 EBF1Q9UH73 591 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 MYRFQ9Y2G1 1151 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 GBF1Q92538 1859 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 DHRS12A0PJE2 317 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 H3BNH8 94 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 MAGEB3O15480 346 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CNPP09543 421 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 HMGA1P17096 107 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 GGT5P36269 586 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 GDF5P43026 501 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 STT3AP46977 705 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 GALK1P51570 392 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CTBSQ01459 385 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 NFYCQ13952 458 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CYP51A1Q16850 503 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 LRRC23Q53EV4 343 aaPredicted RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 PYCR3Q53H96 274 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 LHX8Q68G74 356 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 LPCAT2Q7L5N7 544 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 CAMK1DQ8IU85 385 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 OSBPL11Q9BXB4 747 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 INTS10Q9NVR2 710 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 ZMYM5Q9UJ78 669 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 TRMT6Q9UJA5 497 aaKnown RBP10.7□□□□□ -0.7
VPS52-217ENST00000478934 LRFN2Q9ULH4 789 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
VPS52-217ENST00000478934 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 E2F3O00716 465 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 STX7O15400 261 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 TRMUO75648 421 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 RSL1D1O76021 490 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 C1RP00736 705 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 GSK3BP49841 420 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 ATP4BP51164 291 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 DGKQP52824 942 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 CCL23P55773 120 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 TXNL4AP83876 142 aaKnown RBP10.69□□□□□ -0.7
VPS52-217ENST00000478934 SELPLGQ14242 412 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 PLCL1Q15111 1095 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 C5orf22Q49AR2 442 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 HECTD3Q5T447 861 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 FAM151BQ6UXP7 276 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 Q6ZSR9 355 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 ERMP1Q7Z2K6 904 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 LYSMD3Q7Z3D4 306 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 GPSM1Q86YR5 675 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 LKAAEAR1Q8TD35 194 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 AUTS2Q8WXX7 1259 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 TMEM125Q96AQ2 219 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 ROPN1LQ96C74 230 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 PLK2Q9NYY3 685 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 NDUFA13Q9P0J0 144 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 ABCD2Q9UBJ2 740 aa10.69□□□□□ -0.7
VPS52-217ENST00000478934 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms