RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 AFTPHQ6ULP2 937 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 GKN2Q86XP6 184 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 AGGF1Q8N302 714 aaeCLIP26.45■■□□□ 1.82
CCM2-211ENST00000478582 HEXDCQ8WVB3 486 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 FAM96AQ9H5X1 160 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 SAMD15Q9P1V8 674 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 ZNHIT2Q9UHR6 403 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 PCYT1BQ9Y5K3 369 aaPredicted RBP26.45■■□□□ 1.82
CCM2-211ENST00000478582 TRIM38O00635 465 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 YY2O15391 372 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 GRID2O43424 1007 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 GOT2P00505 430 aaKnown RBP26.44■■□□□ 1.82
CCM2-211ENST00000478582 ANXA6P08133 673 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 CELA2BP08218 269 aaPredicted RBP26.44■■□□□ 1.82
CCM2-211ENST00000478582 CDKN1CP49918 316 aaPredicted RBP26.44■■□□□ 1.82
CCM2-211ENST00000478582 DRG2P55039 364 aaKnown RBP26.44■■□□□ 1.82
CCM2-211ENST00000478582 PRAMEP78395 509 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 CBLBQ13191 982 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 LRP8Q14114 963 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 FNBP1LQ5T0N5 605 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 C8orf74Q6P047 294 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 TMEM135Q86UB9 458 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 NRROSQ86YC3 692 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 OR4L1Q8NH43 312 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 MFSD3Q96ES6 412 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 TTC25Q96NG3 672 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 LRRC1Q9BTT6 524 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 GSDMCQ9BYG8 508 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 ZDHHC3Q9NYG2 299 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 GPSM3Q9Y4H4 160 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 PCDHGA1Q9Y5H4 931 aa26.44■■□□□ 1.82
CCM2-211ENST00000478582 IGLV3-16A0A075B6K0 115 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 OR51F1A6NGY5 319 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 FFAR2O15552 330 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 ACRV1P26436 265 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 CTBSQ01459 385 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 ILF3Q12906 894 aaKnown RBP eCLIP26.43■■□□□ 1.82
CCM2-211ENST00000478582 GTF2H3Q13889 308 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 ST3GAL2Q16842 350 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 DNAJC21Q5F1R6 531 aaKnown RBP26.43■■□□□ 1.82
CCM2-211ENST00000478582 CASC4Q6P4E1 433 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 TMPRSS7Q7RTY8 843 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 SERPINA9Q86WD7 417 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 PIANPQ8IYJ0 282 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 PDIK1LQ8N165 341 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 RASGEF1AQ8N9B8 481 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 FAM181AQ8N9Y4 354 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 OR6P1Q8NGX9 317 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 CCL4L1Q8NHW4 92 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 SCG3Q8WXD2 468 aaKnown RBP26.43■■□□□ 1.82
CCM2-211ENST00000478582 DPH5Q9H2P9 285 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 GRHL1Q9NZI5 618 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 GPR34Q9UPC5 381 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 ST14Q9Y5Y6 855 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 PTPRBP23467 1997 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 PLXNB3Q9ULL4 1909 aa26.43■■□□□ 1.82
CCM2-211ENST00000478582 ESPNB1AK53 854 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 KMOO15229 486 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 MSH3P20585 1137 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 CALCOCO2Q13137 446 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 DEFB133Q30KQ1 61 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 LYPLAL1Q5VWZ2 237 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 KIAA0930Q6ICG6 404 aaPredicted RBP26.42■■□□□ 1.82
CCM2-211ENST00000478582 MICALCLQ6ZW33 695 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 TAS2R42Q7RTR8 314 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 TAF8Q7Z7C8 310 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 LRRTM4Q86VH4 590 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.42■■□□□ 1.822e-6■■■■■ 54.9
CCM2-211ENST00000478582 ZNF514Q96K75 400 aaPredicted RBP26.42■■□□□ 1.82
CCM2-211ENST00000478582 COPS8Q99627 209 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 CEP295Q9C0D2 2601 aa26.42■■□□□ 1.82
CCM2-211ENST00000478582 MAP1BP46821 2468 aaKnown RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 SIGLEC6O43699 453 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 PRSS56P0CW18 603 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 RALBP11234 206 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 AKT1P31749 480 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 ARL4CP56559 192 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 B4GALNT1Q00973 533 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 DHX9Q08211 1270 aaKnown RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 DNAJC3Q13217 504 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 PROX2Q3B8N5 592 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 ANKRD20A4Q4UJ75 823 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 MSS51Q4VC12 460 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 GLE1Q53GS7 698 aaKnown RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 CCDC157Q569K6 752 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 ZCCHC8Q6NZY4 707 aaKnown RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 CES3Q6UWW8 571 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 CERS6Q6ZMG9 384 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 CCNI2Q6ZMN8 369 aaPredicted RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 ZNF547Q8IVP9 402 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 NOA1Q8NC60 698 aaKnown RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 SEC14L1Q92503 715 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 LRRC39Q96DD0 335 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 STAMBPL1Q96FJ0 436 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 NAT9Q9BTE0 207 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 BOCQ9BWV1 1114 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 DOLKQ9UPQ8 538 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 PRKAB1Q9Y478 270 aa26.41■■□□□ 1.82
CCM2-211ENST00000478582 DNMT3AQ9Y6K1 912 aaPredicted RBP26.41■■□□□ 1.82
CCM2-211ENST00000478582 CFAP99D6REC4 459 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms