RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 AIG1Q9NVV5 245 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 ADA2Q9NZK5 511 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 GALPQ9UBC7 116 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 DYTNA2CJ06 578 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 LRRC14BA6NHZ5 514 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 GAPDHSO14556 408 aaPredicted RBP12.09□□□□□ -0.47
PTPRF-212ENST00000477970 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 NPPAP01160 153 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 SLC7A1P30825 629 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 ERFP50548 548 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 CDH18Q13634 790 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 LINGO4Q6UY18 593 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 SNX20Q7Z614 316 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 SYVN1Q86TM6 617 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 GALNT13Q8IUC8 556 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 PDPRQ8NCN5 879 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 EEF1AKMT1Q8WVE0 214 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 LRRC3Q9BY71 257 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 APPL1Q9UKG1 709 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 PPIL1Q9Y3C6 166 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 SLC30A1Q9Y6M5 507 aa12.09□□□□□ -0.47
PTPRF-212ENST00000477970 PRORSD1PA6NEY8 169 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 OR1I1O60431 355 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 UPP2O95045 317 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TRBC1P01850 177 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF7P17097 686 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TSPAN8P19075 237 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 BNIP2Q12982 314 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 SMU1Q2TAY7 513 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 LILRA2Q8N149 483 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 PCDH20Q8N6Y1 951 aaKnown RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 FIBINQ8TAL6 211 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 EID2BQ96D98 161 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 LMLNQ96KR4 655 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ABCB8Q9NUT2 735 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ARMC1Q9NVT9 282 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GNPTGQ9UJJ9 305 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 CPQQ9Y646 472 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 PPP6CO00743 305 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 RNASEH1O60930 286 aaKnown RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GLUD1P00367 558 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 CSF2RAP15509 400 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ZXDBP98169 803 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 SHHQ15465 462 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TMC8Q8IU68 726 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 RBFAQ8N0V3 343 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 EFHBQ8N7U6 833 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 UBTD2Q8WUN7 234 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ISG20Q96AZ6 181 aaKnown RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TUBGCP5Q96RT8 1024 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 SLC22A12Q96S37 553 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TRIM54Q9BYV2 358 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 RIC8BQ9NVN3 520 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 KIAA1522Q9P206 1035 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF225Q9UK10 706 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
PTPRF-212ENST00000477970 PCDHB9Q9Y5E1 797 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 CAPN8A6NHC0 703 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 E5RI56 91 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 SNX2O60749 519 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 ARSAP15289 507 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 RCAN2Q14206 197 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GRB7Q14451 532 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 TGFBIQ15582 683 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 KIF19Q2TAC6 998 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 MACC1Q6ZN28 852 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GPRIN3Q6ZVF9 776 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 LYSMD3Q7Z3D4 306 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 HGH1Q9BTY7 390 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 GPR63Q9BZJ6 419 aa12.08□□□□□ -0.48
PTPRF-212ENST00000477970 AQP12BA6NM10 295 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 EEDO75530 441 aaKnown RBP12.07□□□□□ -0.48
PTPRF-212ENST00000477970 CYBBP04839 570 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 HGFP14210 728 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 HDCP19113 662 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 MSH3P20585 1137 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 ZFP36L2P47974 494 aaKnown RBP12.07□□□□□ -0.48
PTPRF-212ENST00000477970 ERVK-8P63133 956 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 FOLH1Q04609 750 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 TTC23LQ6PF05 361 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 UGT2A3Q6UWM9 527 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 AQP12AQ8IXF9 295 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 DDIASQ8IXT1 998 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 ARL14EPQ8N8R7 260 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-212ENST00000477970 WFDC5Q8TCV5 224 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 SMIM14Q96QK8 99 aa12.07□□□□□ -0.48
PTPRF-212ENST00000477970 PKP2Q99959 881 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms