RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 KRBA2Q6ZNG9 492 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 KMT5CQ86Y97 462 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 RAB43Q86YS6 212 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 TMEM126BQ8IUX1 230 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CEP97Q8IW35 865 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 PYROXD2Q8N2H3 581 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 EMC1Q8N766 993 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CLEC1AQ8NC01 280 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 EXD1Q8NHP7 514 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 DNAJB14Q8TBM8 379 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 COG1Q8WTW3 980 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CHTF18Q8WVB6 975 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CENPIQ92674 756 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF501Q96CX3 271 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 MTFMTQ96DP5 389 aaKnown RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CEP63Q96MT8 703 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 IP6K3Q96PC2 410 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 MCCC1Q96RQ3 725 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 ENKD1Q9H0I2 346 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 RMI1Q9H9A7 625 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 SEMA3GQ9NS98 782 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 OLAHQ9NV23 265 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 PPIL1Q9Y3C6 166 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 PCDHGC4Q9Y5F7 938 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 ANKRD36A6QL64 1941 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 DOCK4Q8N1I0 1966 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TRGV8A0A0C4DH27 118 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CCDC78A2IDD5 438 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 KIAA1324LA8MWY0 1029 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 GOLGA8SH3BPF8 625 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CREB3O43889 395 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 NUAK1O60285 661 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PYGLP06737 847 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CYP2A6P11509 494 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 BRAFP15056 766 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 FOSL1P15407 271 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 OTX2P32243 289 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 HADHAP40939 763 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CA7P43166 264 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 SYKP43405 635 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 ARCN1P48444 511 aaKnown RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 NDUFA8P51970 172 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 AP1S1P61966 158 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 HSD11B2P80365 405 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 ADORA2A-AS1P86434 159 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 APBA1Q02410 837 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 SRSF11Q05519 484 aaKnown RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 Q0VFX4 171 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 GPR18Q14330 331 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF169Q14929 603 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 NCF4Q15080 339 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TLR1Q15399 786 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 GPR19Q15760 415 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CDO1Q16878 200 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CCDC40Q4G0X9 1142 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF658Q5TYW1 1059 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PLEKHA7Q6IQ23 1121 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 RPUSD3Q6P087 351 aaKnown RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM180AQ6UWF9 173 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PHYKPLQ8IUZ5 450 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM59Q8IWR1 403 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PAF1Q8N7H5 531 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 BCORP1Q8N888 145 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TMEM35BQ8NCS4 154 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 OR8K5Q8NH50 307 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 GPT2Q8TD30 523 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 CPT1BQ92523 772 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 NTAN1Q96AB6 310 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM81BQ96LP2 452 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PSKH2Q96QS6 385 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 MAP3K3Q99759 626 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 FOXC2Q99958 501 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 TREX2Q9BQ50 279 aaPredicted RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC39A8Q9C0K1 460 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 KLC4Q9NSK0 619 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PCMTD2Q9NV79 361 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 P4HTMQ9NXG6 502 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 SIK3Q9Y2K2 1263 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PCDHGB6Q9Y5F9 930 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 PRRC2AP48634 2157 aaKnown RBP7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 NBEAL1Q6ZS30 2694 aa7.17□□□□□ -1.26
SPTLC1-205ENST00000477888 JMJD1CQ15652 2540 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 SOCS5O75159 536 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 IGHEP01854 428 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 PAPOLAP51003 745 aaKnown RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 IST1P53990 364 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CSNK1G2P78368 415 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 LTBQ06643 244 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ABRQ12979 859 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 RFTN1Q14699 578 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF789Q5FWF6 425 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 LRRC66Q68CR7 880 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ATL3Q6DD88 541 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM65Q6PJ69 517 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TMEM207Q6UWW9 146 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms