RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 SDR16C5Q8N3Y7 309 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 GOLGA6L1Q8N7Z2 621 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 PPHLN1Q8NEY8 458 aaKnown RBP9.72□□□□□ -0.85
NIFK-205ENST00000477693 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 SCAMP4Q969E2 229 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 CNDP2Q96KP4 475 aaKnown RBP9.72□□□□□ -0.85
NIFK-205ENST00000477693 LRRC61Q9BV99 259 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 FICDQ9BVA6 458 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 TCEAL2Q9H3H9 227 aaPredicted RBP9.72□□□□□ -0.85
NIFK-205ENST00000477693 CAAP1Q9H8G2 361 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 PHPT1Q9NRX4 125 aaPredicted RBP9.72□□□□□ -0.85
NIFK-205ENST00000477693 RAD18Q9NS91 495 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 SPASTQ9UBP0 616 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 CD84Q9UIB8 345 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 WASF3Q9UPY6 502 aa9.72□□□□□ -0.85
NIFK-205ENST00000477693 PRSS38A1L453 326 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 C2orf81A6NN90 581 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 LMO7DNF2Z398 122 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 TRIM38O00635 465 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 FFAR2O15552 330 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 OPA1O60313 960 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 AGTP01019 485 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 TNFP01375 233 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CEACAM5P06731 702 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 PIRTP0C851 137 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CKMT2P17540 419 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 PSMA3P25788 255 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 ELK3P41970 407 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CHRNA4P43681 627 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 SHC2P98077 582 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 ELOCQ15369 112 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 KYNUQ16719 465 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 SKIDA1Q1XH10 827 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 KLHL38Q2WGJ6 581 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 STEAP4Q687X5 459 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 KCTD16Q68DU8 428 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CASC4Q6P4E1 433 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 SLCO6A1Q86UG4 719 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 HID1Q8IV36 788 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 RIBC1Q8N443 379 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 FSTL5Q8N475 847 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 TAB3Q8N5C8 712 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 FAM181AQ8N9Y4 354 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 FBXO36Q8NEA4 188 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 OR52K1Q8NGK4 314 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 GSDMBQ8TAX9 411 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 LMX1AQ8TE12 382 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 UBLCP1Q8WVY7 318 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 ADAMTS14Q8WXS8 1223 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 OR1E3Q8WZA6 343 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CDKL2Q92772 493 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 TSACCQ96A04 125 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 PDXPQ96GD0 296 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 COX14Q96I36 57 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 RUFY1Q96T51 708 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CYTH2Q99418 400 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 AGAP2Q99490 1192 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 ZSCAN5AQ9BUG6 496 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 RIOK2Q9BVS4 552 aaKnown RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 GPR63Q9BZJ6 419 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 CLPBQ9H078 707 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 CDC42EP4Q9H3Q1 356 aaKnown RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 FAM83DQ9H4H8 585 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 LRRC4CQ9HCJ2 640 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 NSMCE4AQ9NXX6 385 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 NINJ2Q9NZG7 142 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.71□□□□□ -0.86
NIFK-205ENST00000477693 SOX13Q9UN79 622 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 APOBEC2Q9Y235 224 aaKnown RBP9.71□□□□□ -0.86
NIFK-205ENST00000477693 SLC17A4Q9Y2C5 497 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 SPO11Q9Y5K1 396 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 MAD1L1Q9Y6D9 718 aa9.71□□□□□ -0.86
NIFK-205ENST00000477693 LRP4O75096 1905 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 MROH6A6NGR9 719 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 GOLGA6L10A6NI86 522 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 FADS2P1A8MWK0 482 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 AURKAO14965 403 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 CDK4P11802 303 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 CKMT1AP12532 417 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 CTSEP14091 401 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 ACP1P24666 158 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 HADHAP40939 763 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 ACADVLP49748 655 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 SESN2P58004 480 aaPredicted RBP9.7□□□□□ -0.86
NIFK-205ENST00000477693 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 ILKQ13418 452 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 SPARCL1Q14515 664 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 SLC29A2Q14542 456 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 TAF1AQ15573 450 aaPredicted RBP9.7□□□□□ -0.86
NIFK-205ENST00000477693 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 PDPK2PQ6A1A2 396 aa9.7□□□□□ -0.86
NIFK-205ENST00000477693 ZCCHC8Q6NZY4 707 aaKnown RBP9.7□□□□□ -0.86
NIFK-205ENST00000477693 LVRNQ6Q4G3 990 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms