RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GRID2O43424 1007 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 ANXA9O76027 345 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 PYGLP06737 847 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 GLB1P16278 677 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 GRIA1P42261 906 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 KCNJ1P48048 391 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 CFHR1Q03591 330 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 RTP5Q14D33 572 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 GSTA5Q7RTV2 222 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 PRR11Q96HE9 360 aaPredicted RBP17.43■□□□□ 0.38
PTPN7-209ENST00000477554 DEPDC7Q96QD5 511 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 LRRN3Q9H3W5 708 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 FAM96AQ9H5X1 160 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 SATB2Q9UPW6 733 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 ACACAQ13085 2346 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 CCDC78A2IDD5 438 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 A6NCN8 305 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 D6RAR5 112 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 SNX2O60749 519 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 GAS8O95995 478 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 HGFP14210 728 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 SPAM1P38567 509 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 CTSCP53634 463 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 AMZ1Q400G9 498 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
PTPN7-209ENST00000477554 C3orf38Q5JPI3 329 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 TTC27Q6P3X3 843 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 C19orf48Q6RUI8 117 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
PTPN7-209ENST00000477554 ARHGEF18Q6ZSZ5 1173 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 C11orf96Q7Z7L8 435 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 CACTIN-AS1Q8N1I8 211 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 SLC37A2Q8TED4 501 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 SLCO2A1Q92959 643 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 PLEKHG4BQ96PX9 1271 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 NRSN2Q9GZP1 204 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 TRIM39Q9HCM9 518 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 TMEM9Q9P0T7 183 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 APPL1Q9UKG1 709 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 DNAJC16Q9Y2G8 782 aa17.42■□□□□ 0.38
PTPN7-209ENST00000477554 EFCAB8A8MWE9 144 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 CHUKO15111 745 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 LDB2O43679 373 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 STK10O94804 968 aaKnown RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 ALDH4A1P30038 563 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 CDKN1CP49918 316 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 ZNF140P52738 457 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 GABREP78334 506 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 XIAPP98170 497 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 DR1Q01658 176 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 PEX6Q13608 980 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 SPIDRQ14159 915 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 PARP6Q2NL67 630 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 C8orf74Q6P047 294 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 FOXR1Q6PIV2 292 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 ZNF574Q6ZN55 896 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 SYDE1Q6ZW31 735 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 USP53Q70EK8 1073 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 RASGEF1AQ8N9B8 481 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 NXPE2Q96DL1 559 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 RTP4Q96DX8 246 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 NUDT22Q9BRQ3 303 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 SEMA6CQ9H3T2 930 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 TRABDQ9H4I3 376 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 KLC4Q9NSK0 619 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 EVA1BQ9NVM1 165 aa17.41■□□□□ 0.38
PTPN7-209ENST00000477554 AAR2Q9Y312 384 aaKnown RBP17.41■□□□□ 0.38
PTPN7-209ENST00000477554 GLYATL1P3A0A0U1RQE8 302 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 FAM187AA6NFU0 413 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 PRR19A6NJB7 356 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 NUDT21O43809 227 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 IFNB1P01574 187 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 HOXB3P14651 431 aaPredicted RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 MPSTP25325 297 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 CSF2RBP32927 897 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 ACTN2P35609 894 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 PRPSAP1Q14558 356 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 TAF1AQ15573 450 aaPredicted RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 SEPT7Q16181 437 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 GPRC6AQ5T6X5 926 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 XKR5Q6UX68 686 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 ZNF438Q7Z4V0 828 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 PHYKPLQ8IUZ5 450 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 SFRP1Q8N474 314 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 CCDC89Q8N998 374 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 NOA1Q8NC60 698 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 DCBLD2Q96PD2 775 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 VPS35Q96QK1 796 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 GFM1Q96RP9 751 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 ETNK1Q9HBU6 452 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 HACD3Q9P035 362 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 DKK4Q9UBT3 224 aa17.4■□□□□ 0.38
PTPN7-209ENST00000477554 URB1O60287 2271 aaKnown RBP17.4■□□□□ 0.38
PTPN7-209ENST00000477554 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 BRAFP15056 766 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 LPOP22079 712 aaPredicted RBP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 ITPKBP27987 946 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 CD1CP29017 333 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms