RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RAI14Q9P0K7 980 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 HMG20BQ9P0W2 317 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 ZNF711Q9Y462 761 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 CYP46A1Q9Y6A2 500 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 SBF1O95248 1867 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 MYO5AQ9Y4I1 1855 aaKnown RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 PDS5AQ29RF7 1337 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 MYO3BQ8WXR4 1341 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 MYH2Q9UKX2 1941 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 TYW5A2RUC4 315 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 CEP104O60308 925 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 LDHCP07864 332 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 ZFYP08048 801 aaPredicted RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 HNRNPA1P09651 372 aaKnown RBP eCLIP4.06□□□□□ -1.76
UBR3-209ENST00000477461 RYKP34925 604 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 CDH15P55291 814 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 GSTO1P78417 241 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 PHEXP78562 749 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 GPR68Q15743 365 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 PMS2CLQ68D20 193 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 INO80CQ6PI98 192 aaPredicted RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 TRMT1LQ7Z2T5 733 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 ZC3HC1Q86WB0 502 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 DZIP1Q86YF9 867 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 NAXEQ8NCW5 288 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 GDPD5Q8WTR4 605 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 ST8SIA4Q92187 359 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 ZBTB10Q96DT7 871 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 ZNF385AQ96PM9 386 aaKnown RBP4.06□□□□□ -1.76
UBR3-209ENST00000477461 JMJD4Q9H9V9 463 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 UBN1Q9NPG3 1134 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 SMARCAL1Q9NZC9 954 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.06□□□□□ -1.76
UBR3-209ENST00000477461 ADAM18Q9Y3Q7 739 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 PCDHGB5Q9Y5G0 923 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 PSME4Q14997 1843 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 DOCK2Q92608 1830 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 MAST2Q6P0Q8 1798 aa4.06□□□□□ -1.76
UBR3-209ENST00000477461 SCN9AQ15858 1988 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SNED1Q8TER0 1413 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 RFX7Q2KHR2 1363 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 FAM205AQ6ZU69 1335 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SALL1Q9NSC2 1324 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 TIAM2Q8IVF5 1701 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 A0A0G2JPF8 293 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 HNRNPCL3B7ZW38 293 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 PSMD14O00487 310 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 RNF113AO15541 343 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 ZIC3O60481 467 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 HNRNPCL1O60812 293 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 BAG3O95817 575 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 ATP1A1P05023 1023 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 URODP06132 367 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 CFC1P0CG37 223 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 HNRNPCL4P0DMR1 293 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 BRWD1-AS2P59051 145 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 FKBP1AP62942 108 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 YWHAZP63104 245 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 ZNF155Q12901 538 aaPredicted RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 EDRF1Q3B7T1 1238 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 PAPPA-AS1Q5QFB9 102 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SLC9C2Q5TAH2 1124 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 NAA16Q6N069 864 aaPredicted RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 ADAM5Q6NVV9 412 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 TMED8Q6PL24 325 aaPredicted RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 NEK10Q6ZWH5 1172 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 TICAM2Q86XR7 235 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 KLHDC8BQ8IXV7 354 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SNAPC3Q92966 411 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 APOPT1Q96IL0 206 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 FEM1CQ96JP0 617 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 AGXT2Q9BYV1 514 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 MMP28Q9H239 520 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 UNC45AQ9H3U1 944 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SLC32A1Q9H598 525 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 UPF2Q9HAU5 1272 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 PIH1D3Q9NQM4 214 aaKnown RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 CYSLTR2Q9NS75 346 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 ANKRD10Q9NXR5 420 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 NDRG3Q9UGV2 375 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 SLCO3A1Q9UIG8 710 aa4.05□□□□□ -1.76
UBR3-209ENST00000477461 COL1A1P02452 1464 aaPredicted RBP4.05□□□□□ -1.76
UBR3-209ENST00000477461 RAD50Q92878 1312 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 ZNF532Q9HCE3 1301 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 A0A1W2PQM1 296 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 PABPN1LA6NDY0 278 aaKnown RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 YDJCA8MPS7 323 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TSPAN4O14817 238 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 ZG16O60844 167 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 REC8O95072 547 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 F9P00740 461 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 COX7A2P14406 83 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 ZNF8P17098 575 aaPredicted RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 RPS12P25398 132 aaKnown RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 CHMLP26374 656 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 MMP14P50281 582 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TUBP50607 506 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 FUT6P51993 359 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms