RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FAM169AQ9Y6X4 670 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 OR2AG2A6NM03 316 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 PIAS1O75925 651 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 USP1O94782 785 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 CDK14O94921 469 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 IVLP07476 585 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 ERVK-10P10266 1014 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 PGAM1P18669 254 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 KELP23276 732 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 ACRV1P26436 265 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 CRYMQ14894 314 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 FASTKD1Q53R41 847 aaKnown RBP15.68■□□□□ 0.1
COPS3-207ENST00000477299 TMEM220Q6QAJ8 160 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 AFTPHQ6ULP2 937 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 CRTC3Q6UUV7 619 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 DENND6AQ8IWF6 608 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 GSPT2Q8IYD1 628 aaKnown RBP15.68■□□□□ 0.1
COPS3-207ENST00000477299 CLDN19Q8N6F1 224 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
COPS3-207ENST00000477299 PEX13Q92968 403 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 C9orf72Q96LT7 481 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 CATSPERZQ9NTU4 200 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 ZDHHC3Q9NYG2 299 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
COPS3-207ENST00000477299 NFU1Q9UMS0 254 aa15.68■□□□□ 0.1
COPS3-207ENST00000477299 IGLV3-16A0A075B6K0 115 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 TRIM38O00635 465 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CHUKO15111 745 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 FFAR2O15552 330 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 GRID2O43424 1007 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 SLU7O95391 586 aaKnown RBP15.67■□□□□ 0.1
COPS3-207ENST00000477299 MYBL2P10244 700 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 SSTR1P30872 391 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 AKT1P31749 480 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 ARRB1P49407 418 aaPredicted RBP15.67■□□□□ 0.1
COPS3-207ENST00000477299 CCT8P50990 548 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CTBSQ01459 385 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CAV1Q03135 178 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CBLBQ13191 982 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CTBP1Q13363 440 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 NAA30Q147X3 362 aaPredicted RBP15.67■□□□□ 0.1
COPS3-207ENST00000477299 DEFB133Q30KQ1 61 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 GPR33Q49SQ1 333 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 HSP90AA5PQ58FG0 334 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 LDLRAP1Q5SW96 308 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 STEAP4Q687X5 459 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CHST15Q7LFX5 561 aaPredicted RBP15.67■□□□□ 0.1
COPS3-207ENST00000477299 C11orf96Q7Z7L8 435 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 SLC13A1Q9BZW2 595 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 C20orf96Q9NUD7 363 aaPredicted RBP15.67■□□□□ 0.1
COPS3-207ENST00000477299 VPS18Q9P253 973 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CFAP54Q96N23 3096 aa15.67■□□□□ 0.1
COPS3-207ENST00000477299 CEP250Q9BV73 2442 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 ASXL3Q9C0F0 2248 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 YY2O15391 372 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 AQP9O43315 295 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 SH3BP5O60239 455 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 EML2O95834 649 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 POLBP06746 335 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 CTSEP14091 401 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 MSH3P20585 1137 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 MAGEA4P43358 317 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 GPX6P59796 221 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 HNRNPKP61978 463 aaKnown RBP eCLIP15.66■□□□□ 0.1
COPS3-207ENST00000477299 HLTFQ14527 1009 aaKnown RBP eCLIP15.66■□□□□ 0.1
COPS3-207ENST00000477299 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 SPANXN3Q5MJ09 141 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 NEPROQ6NW34 567 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 XKR5Q6UX68 686 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 NAPRTQ6XQN6 538 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 DBX2Q6ZNG2 339 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 CENPUQ71F23 418 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 EID2Q8N6I1 236 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
COPS3-207ENST00000477299 ULK4Q96C45 1275 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 SGSM3Q96HU1 749 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 OR2M4Q96R27 311 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 COPS8Q99627 209 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 SMYD2Q9NRG4 433 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 IARS2Q9NSE4 1012 aaKnown RBP15.66■□□□□ 0.1
COPS3-207ENST00000477299 SPATS2LQ9NUQ6 558 aaKnown RBP15.66■□□□□ 0.1
COPS3-207ENST00000477299 GULP1Q9UBP9 304 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 KCNK6Q9Y257 313 aa15.66■□□□□ 0.1
COPS3-207ENST00000477299 RP1P56715 2156 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 VEGFDO43915 354 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 S1PR4O95977 384 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 ACP5P13686 325 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 ABCG1P45844 678 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 MPP1Q00013 466 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 LONRF1Q17RB8 773 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 SLC30A9Q6PML9 568 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 FAM83HQ6ZRV2 1179 aaPredicted RBP15.65■□□□□ 0.1
COPS3-207ENST00000477299 KCNMB4Q86W47 210 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 GALNT13Q8IUC8 556 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 TRAPPC5Q8IUR0 188 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 OXR1Q8N573 874 aa15.65■□□□□ 0.1
COPS3-207ENST00000477299 LILRA3Q8N6C8 439 aaPredicted RBP15.65■□□□□ 0.1
COPS3-207ENST00000477299 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms