RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 GORASP1Q9BQQ3 440 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 OR2AG1Q9H205 316 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 CARD9Q9H257 536 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 GRPEL1Q9HAV7 217 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 ARFGAP3Q9NP61 516 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 R3HDM2Q9Y2K5 976 aaKnown RBP16■□□□□ 0.15
COL1A1-205ENST00000476387 PLEKHM1Q9Y4G2 1056 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 IGHV1OR21-1A0A087WYE8 117 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 C5orf60A6NFR6 353 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 GPR89AB7ZAQ6 455 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 GRID2O43424 1007 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 DNAJC6O75061 913 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 PPFIA2O75334 1257 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 AGTP01019 485 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 GPR89BP0CG08 455 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 ETV5P41161 510 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 LIMK2P53671 638 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 GPLD1P80108 840 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 P3H1Q32P28 736 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 TMEM164Q5U3C3 297 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 USP53Q70EK8 1073 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 SFRP1Q8N474 314 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 FAM71DQ8N9W8 422 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 GDAP1Q8TB36 358 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 USP7Q93009 1102 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 TBL1YQ9BQ87 522 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 APOL2Q9BQE5 337 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 TRIM39Q9HCM9 518 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL1A1-205ENST00000476387 FOXJ2Q9P0K8 574 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 ATXN10Q9UBB4 475 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 PRKAB1Q9Y478 270 aa15.99■□□□□ 0.15
COL1A1-205ENST00000476387 TCRBV7S2A1N4TA0A589 114 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 GOLGA6L3A6NEY3 463 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 C9orf172C9J069 976 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-205ENST00000476387 STX7O15400 261 aaKnown RBP15.98■□□□□ 0.15
COL1A1-205ENST00000476387 EFSO43281 561 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 NUAK1O60285 661 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 ACP5P13686 325 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 MAPK10P53779 464 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 TGIF1Q15583 401 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 MEI1Q5TIA1 1274 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 KIAA1614Q5VZ46 1190 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 FAM151BQ6UXP7 276 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 DTX1Q86Y01 620 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 TRIM58Q8NG06 486 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 SLC35B2Q8TB61 432 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 VPS35Q96QK1 796 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 FRMD8P1Q9BZ68 369 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-205ENST00000476387 KCNK4Q9NYG8 393 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 IL17CQ9P0M4 197 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 PCDHB11Q9Y5F2 797 aa15.98■□□□□ 0.15
COL1A1-205ENST00000476387 GLYATL1P3A0A0U1RQE8 302 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 C2orf81A6NN90 581 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 VEGFDO43915 354 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 THRAP10827 490 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SLC2A4P14672 509 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ZNF8P17098 575 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 LPOP22079 712 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 CSF2RBP32927 897 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ADRA1AP35348 466 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ITGA9Q13797 1035 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 GTF2H3Q13889 308 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 TAF1AQ15573 450 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 INSCQ1MX18 579 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 PARP6Q2NL67 630 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ATP13A5Q4VNC0 1218 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ZNF648Q5T619 568 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 CRTC3Q6UUV7 619 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 RANBP10Q6VN20 620 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ADGRG6Q86SQ4 1221 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ZNF605Q86T29 641 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 LRRTM4Q86VH4 590 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SLC13A5Q86YT5 568 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 AGBL5Q8NDL9 886 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SLC37A2Q8TED4 501 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ATG4AQ8WYN0 398 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SGF29Q96ES7 293 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ZCCHC2Q9C0B9 1178 aaKnown RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 STN1Q9H668 368 aaKnown RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SARS2Q9NP81 518 aaKnown RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 IL26Q9NPH9 171 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 FEZ2Q9UHY8 353 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 KCNK6Q9Y257 313 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 PCDHGA3Q9Y5H0 932 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 PCYT1BQ9Y5K3 369 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-205ENST00000476387 ARL5AQ9Y689 179 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 SPTA1P02549 2419 aa15.97■□□□□ 0.15
COL1A1-205ENST00000476387 KMOO15229 486 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 MTX2O75431 263 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 CDK14O94921 469 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 CRTAMO95727 393 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms