RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 SLC17A4Q9Y2C5 497 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 FAM169AQ9Y6X4 670 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 CNOT1A5YKK6 2376 aaKnown RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 COL5A1P20908 1838 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GOLGA4Q13439 2230 aaKnown RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 NDC80O14777 642 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 TNFRSF10CO14798 259 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 TM4SF5O14894 197 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 EIF3HO15372 352 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SGTAO43765 313 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 VAPBO95292 243 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 TNFP01375 233 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PGAM1P18669 254 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 DEFB133Q30KQ1 61 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 DNAJC21Q5F1R6 531 aaKnown RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 KIAA0930Q6ICG6 404 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SLC25A45Q8N413 288 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 EIF1ADQ8N9N8 165 aaKnown RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ZNF398Q8TD17 642 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ZNF669Q96BR6 464 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 C9orf72Q96LT7 481 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 VPS35Q96QK1 796 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 FMO2Q99518 471 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 CLPBQ9H078 707 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 TMEM168Q9H0V1 697 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 LRRC4CQ9HCJ2 640 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SMOXQ9NWM0 555 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 APPL1Q9UKG1 709 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 DGKBQ9Y6T7 804 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PCNX2A6NKB5 2137 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 IGLV3-16A0A075B6K0 115 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PIAS1O75925 651 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SSTR1P30872 391 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 MAGEA4P43358 317 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ID4P47928 161 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 NOVA1P51513 510 aaKnown RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 HLTFQ14527 1009 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PUM1Q14671 1186 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 WDR93Q6P2C0 686 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 CENPUQ71F23 418 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PIP4P1Q86T03 277 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 LDB1Q86U70 411 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 FOXP3Q9BZS1 431 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 OR2AG1Q9H205 316 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 EPB41L4BQ9H329 900 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SLC32A1Q9H598 525 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ASB8Q9H765 288 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 MOCS1Q9NZB8 636 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SAMD15Q9P1V8 674 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ATXN10Q9UBB4 475 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ZC3H7BQ9UGR2 993 aaKnown RBP14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PCOLCE2Q9UKZ9 415 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 PRKAB1Q9Y478 270 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 ST14Q9Y5Y6 855 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SLC30A1Q9Y6M5 507 aa14.23□□□□□ -0.13
CCNL1-217ENST00000476367 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 GIPC1O14908 333 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 IVLP07476 585 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 ITGALP20701 1170 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 LAMB3Q13751 1172 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 ELOCQ15369 112 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 ZRANB3Q5FWF4 1079 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 ZNF789Q5FWF6 425 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 GPRC6AQ5T6X5 926 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 CRTC3Q6UUV7 619 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 DBX2Q6ZNG2 339 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 SNX20Q7Z614 316 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 GALNT13Q8IUC8 556 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 OR4L1Q8NH43 312 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 CCL4L1Q8NHW4 92 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 UBXN4Q92575 508 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 OR2M4Q96R27 311 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 BOCQ9BWV1 1114 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 VPS18Q9P253 973 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 SLC17A6Q9P2U8 582 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 FTSJ1Q9UET6 329 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 ZNHIT2Q9UHR6 403 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 CRLS1Q9UJA2 301 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 RAB21Q9UL25 225 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
CCNL1-217ENST00000476367 NEMP2A6NFY4 417 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 TRIM38O00635 465 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 POLBP06746 335 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 ANXA6P08133 673 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 ERVK-10P10266 1014 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 ALPPL2P10696 532 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 CSRP1P21291 193 aaKnown RBP14.21□□□□□ -0.13
CCNL1-217ENST00000476367 AKT1P31749 480 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 TUBB4BP68371 445 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 DBN1Q16643 649 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 XKR5Q6UX68 686 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 ADGRG6Q86SQ4 1221 aa14.21□□□□□ -0.13
CCNL1-217ENST00000476367 NXPE1Q8N323 547 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms