RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 VCPIP1Q96JH7 1222 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CTAGE1Q96RT6 745 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 DDOQ99489 341 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 PRRX2Q99811 253 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 PCGF1Q9BSM1 259 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 PIGMQ9H3S5 423 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 HIPK3Q9H422 1215 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 WDR6Q9NNW5 1121 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 MLXIPLQ9NP71 852 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ZBTB40Q9NUA8 1239 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 DNAJC17Q9NVM6 304 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 LARSQ9P2J5 1176 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 EXOC7Q9UPT5 735 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ERVK-11Q9UQG0 969 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 RPH3AQ9Y2J0 694 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 WBP11Q9Y2W2 641 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 POLR2AP24928 1970 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 A0A087WV48 116 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 A0A096LPK6 155 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 CPED1A4D0V7 1026 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 YDJCA8MPS7 323 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 VCYO14598 125 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 DAB1O75553 588 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 TMCC1O94876 653 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 GCP02774 474 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 NHLRC4P0CG21 123 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 PRLRP16471 622 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 CCNA2P20248 432 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 MYF6P23409 242 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 EEF1B2P24534 225 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 FASLGP48023 281 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 CENPAP49450 140 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ATXN3P54252 364 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 SIRPAP78324 504 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 HSPB3Q12988 150 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 PTPRCAPQ14761 206 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 RABEP1Q15276 862 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 PNLIPRP3Q17RR3 467 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 KRT24Q2M2I5 525 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 VWC2Q2TAL6 325 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 TWISTNBQ3B726 338 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 FUT11Q495W5 492 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 SYTL3Q4VX76 610 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 SOWAHCQ53LP3 525 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 KIAA1755Q5JYT7 1200 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 SPOUT1Q5T280 376 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 PRAMEF17Q5VTA0 474 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 INTS8Q75QN2 995 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ADIPOR2Q86V24 386 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 TMEM173Q86WV6 379 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 PARP16Q8N5Y8 322 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 DBF4BQ8NFT6 615 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 FBXO30Q8TB52 745 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 HEXDCQ8WVB3 486 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 KAT2AQ92830 837 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 MIB2Q96AX9 1013 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 RNF183Q96D59 192 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF570Q96NI8 536 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 EFHD1Q9BUP0 239 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ABHD6Q9BV23 337 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 GTPBP2Q9BX10 602 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 MINDY3Q9H8M7 445 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ACTR5Q9H9F9 607 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 C17orf75Q9HAS0 396 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 VPS18Q9P253 973 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 DNAJB4Q9UDY4 337 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 FBXL5Q9UKA1 691 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ITM2BQ9Y287 266 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 TDRKHQ9Y2W6 561 aaKnown RBP4.17□□□□□ -1.74
VPS13D-207ENST00000476169 CLIC4Q9Y696 253 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 ATAD2BQ9ULI0 1458 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 CC2D2AQ9P2K1 1620 aa4.17□□□□□ -1.74
VPS13D-207ENST00000476169 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 DPPA5A6NC42 116 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 FOXN1O15353 648 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 PRAMEF11O60813 436 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 PEX11AO75192 247 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 AKAP3O75969 853 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 TRIM16O95361 564 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 GH2P01242 217 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ADRB1P08588 477 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 SBK2P0C263 348 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ARF4P18085 180 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 SRD5A1P18405 259 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 GNAZP19086 355 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 KCNA5P22460 613 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 CDC25CP30307 473 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 RYKP34925 604 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 SLC16A2P36021 539 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF132P52740 706 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 TRA2AQ13595 282 aaKnown RBP eCLIP4.16□□□□□ -1.743e-6■□□□□ 8.6
VPS13D-207ENST00000476169 MAPK11Q15759 364 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 INAQ16352 499 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ESCO2Q56NI9 601 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 PRAMEF19Q5SWL8 479 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 TBC1D9BQ66K14 1250 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 C15orf39Q6ZRI6 1047 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZER1Q7Z7L7 766 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms