RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TSNAXIP1Q2TAA8 658 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 MAP7D1Q3KQU3 841 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 LDLRAP1Q5SW96 308 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 AGAP9Q5VTM2 703 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 PEAR1Q5VY43 1037 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KCTD16Q68DU8 428 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 LRRC8EQ6NSJ5 796 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KLC3Q6P597 504 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SLC36A4Q6YBV0 504 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TAS2R42Q7RTR8 314 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 PTAR1Q7Z6K3 402 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KIRREL3Q8IZU9 778 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 RBFAQ8N0V3 343 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 PGBD3Q8N328 593 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 CHCHD4Q8N4Q1 142 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TRAM1L1Q8N609 369 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 OTUD6BQ8N6M0 293 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 RLN3Q8WXF3 142 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 CCDC126Q96EE4 140 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF514Q96K75 400 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 PANX3Q96QZ0 392 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 GPR22Q99680 433 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 WDR83Q9BRX9 315 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ASB8Q9H765 288 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TMEM74BQ9NUR3 256 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 INTS9Q9NV88 658 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 MKS1Q9NXB0 559 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TAS2R13Q9NYV9 303 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TBK1Q9UHD2 729 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 PILRBQ9UKJ0 227 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ADAM21Q9UKJ8 722 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 FZD4Q9ULV1 537 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TMCO1Q9UM00 188 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ACOT9Q9Y305 439 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ARL5AQ9Y689 179 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 DNMT3AQ9Y6K1 912 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ASXL3Q9C0F0 2248 aa6.96□□□□□ -1.29
SHQ1-207ENST00000475558 PLXND1Q9Y4D7 1925 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CCDC162PA2VCL2 907 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 AGAP14A8MT82 685 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CXorf49A8MYA2 514 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 GPR89AB7ZAQ6 455 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 EIF3FO00303 357 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 PRMT5O14744 637 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 AREL1O15033 823 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM24O15164 1050 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 BIRC5O15392 142 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 LZTS3O60299 673 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 KCNJ13O60928 360 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 GLRA3O75311 464 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ZNF217O75362 1048 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 HAUS5O94927 633 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 PIGNO95427 931 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CLDN7O95471 211 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 KLF8O95600 359 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CAPNS1P04632 268 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 SYPP08247 313 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 OR56A5P0C7T3 313 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ELFN1P0C7U0 828 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 GPR89BP0CG08 455 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ADRB3P13945 408 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ITPKAP23677 461 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 GCAP28676 217 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ALDH3A1P30838 453 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 MDH1P40925 334 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 IL12RB1P42701 662 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RAB10P61026 200 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RPS21P63220 83 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 SGCGQ13326 291 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 SLC14A1Q13336 389 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 MTM1Q13496 603 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 OLIG2Q13516 323 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CST6Q15828 149 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 TTLL9Q3SXZ7 439 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 TTMPQ5BVD1 217 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ZRANB3Q5FWF4 1079 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 MROH9Q5TGP6 573 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 HHATQ5VTY9 493 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ZNF470Q6ECI4 717 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 KIAA1161Q6NSJ0 714 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CES3Q6UWW8 571 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 LIPIQ6XZB0 460 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RAPH1Q70E73 1250 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ARMCX6Q7L4S7 300 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 LYSMD3Q7Z3D4 306 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RAB44Q7Z6P3 723 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D1Q86TI0 1168 aaPredicted RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 PDZD3Q86UT5 571 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 ZC3HC1Q86WB0 502 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 MMAAQ8IVH4 418 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 NKAPQ8N5F7 415 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 IL17RCQ8NAC3 791 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 TXNDC5Q8NBS9 432 aaKnown RBP6.96□□□□□ -1.3
SHQ1-207ENST00000475558 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RAB3IL1Q8TBN0 382 aa6.96□□□□□ -1.3
SHQ1-207ENST00000475558 RDH11Q8TC12 318 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms