RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 EFL1Q7Z2Z2 1120 aaKnown RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 TSPAN33Q86UF1 283 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 ANKMY2Q8IV38 441 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 RAVER1Q8IY67 606 aaKnown RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 PAF1Q8N7H5 531 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 ARL10Q8N8L6 244 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 IPMKQ8NFU5 416 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 SPATA22Q8NHS9 363 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 GLMNQ92990 594 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 STAMBPL1Q96FJ0 436 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 OXNAD1Q96HP4 312 aaPredicted RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 LYSMD1Q96S90 227 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 GORASP1Q9BQQ3 440 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 TMEM109Q9BVC6 243 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 STMN4Q9H169 189 aaPredicted RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 WDR26Q9H7D7 661 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 UBP1Q9NZI7 540 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 ZC3H7BQ9UGR2 993 aaKnown RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 RPL26L1Q9UNX3 145 aaKnown RBP15.51■□□□□ 0.07
CPSF3-203ENST00000475482 CHMP2BQ9UQN3 213 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 MAD1L1Q9Y6D9 718 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 CACNA1GO43497 2377 aa15.51■□□□□ 0.07
CPSF3-203ENST00000475482 ZFC3H1O60293 1989 aaKnown RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 CPED1A4D0V7 1026 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 AVILO75366 819 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 PMPCBO75439 489 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 MT-CYBP00156 380 aaPredicted RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SOD1P00441 154 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 FUCA1P04066 466 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 MYZAPP0CAP1 466 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 CTSEP14091 401 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 STX2P32856 288 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 WNT3AP56704 352 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SESN2P58004 480 aaPredicted RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 PTSQ03393 145 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 ISXQ2M1V0 245 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 MSS51Q4VC12 460 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 CEP85LQ5SZL2 805 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 CASC4Q6P4E1 433 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 C3orf62Q6ZUJ4 267 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 RD3Q7Z3Z2 195 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 GKN2Q86XP6 184 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 GPR156Q8NFN8 814 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 OR52K1Q8NGK4 314 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 MAPK15Q8TD08 544 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SCG3Q8WXD2 468 aaKnown RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 GRAMD1AQ96CP6 724 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SCARF2Q96GP6 870 aaPredicted RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SIGLEC10Q96LC7 697 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 DEPDC7Q96QD5 511 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 SMIM14Q96QK8 99 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 FICDQ9BVA6 458 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 EPB41L4BQ9H329 900 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 LRRC4CQ9HCJ2 640 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 MRPL40Q9NQ50 206 aaKnown RBP15.5■□□□□ 0.07
CPSF3-203ENST00000475482 PADI4Q9UM07 663 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 PCDHB1Q9Y5F3 818 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 NBEAQ8NFP9 2946 aa15.5■□□□□ 0.07
CPSF3-203ENST00000475482 A0A0U1RQS6 177 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 CAPN8A6NHC0 703 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 GOLGA8KD6RF30 607 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 NTN3O00634 580 aaPredicted RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 TLX3O43711 291 aaPredicted RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 TCEA3O75764 348 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 DXOO77932 396 aaKnown RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 CEACAM5P06731 702 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 POLBP06746 335 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 ZNF30P17039 623 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 CTPS1P17812 591 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 PGAM1P18669 254 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 HLA-DPA1P20036 260 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 SKOR1P84550 965 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 CDK3Q00526 305 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 ARHGEF7Q14155 803 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 SPARCL1Q14515 664 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 FASTKD3Q14CZ7 662 aaKnown RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 HP1BP3Q5SSJ5 553 aaPredicted RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 LRRC66Q68CR7 880 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 KDELC1Q6UW63 502 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 ZNF765Q7L2R6 523 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 NDUFAF2Q8N183 169 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 SNIP1Q8TAD8 396 aaKnown RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 WDR48Q8TAF3 677 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 PTCD2Q8WV60 388 aaKnown RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 TADA1Q96BN2 335 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 TMEM168Q9H0V1 697 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 ABCG4Q9H172 646 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 ARNT2Q9HBZ2 717 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 PHPT1Q9NRX4 125 aaPredicted RBP15.49■□□□□ 0.07
CPSF3-203ENST00000475482 FETUBQ9UGM5 382 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 CHKBQ9Y259 395 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 NFS1Q9Y697 457 aa15.49■□□□□ 0.07
CPSF3-203ENST00000475482 EXOC1LA0A1B0GW35 172 aa15.48■□□□□ 0.07
CPSF3-203ENST00000475482 PRSS38A1L453 326 aa15.48■□□□□ 0.07
CPSF3-203ENST00000475482 RASGRF2O14827 1237 aa15.48■□□□□ 0.07
CPSF3-203ENST00000475482 NOBOXO60393 691 aa15.48■□□□□ 0.07
CPSF3-203ENST00000475482 BRINP1O60477 761 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms