RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 ZNF215Q9UL58 517 aaPredicted RBP4.72□□□□□ -1.65
SENP6-206ENST00000474906 LSM4Q9Y4Z0 139 aaKnown RBP4.72□□□□□ -1.65
SENP6-206ENST00000474906 SNX8Q9Y5X2 465 aa4.72□□□□□ -1.65
SENP6-206ENST00000474906 KCNE2Q9Y6J6 123 aa4.72□□□□□ -1.65
SENP6-206ENST00000474906 PIAS3Q9Y6X2 628 aa4.72□□□□□ -1.65
SENP6-206ENST00000474906 hCG_1807616A0A1W2PRN6 198 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 MYO1GB0I1T2 1018 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 EIF3CLB5ME19 914 aaKnown RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 IGHV4-39P01824 125 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 CSH1P0DML2 217 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 CSH2P0DML3 217 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 PORP16435 677 aaPredicted RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 ACTN2P35609 894 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 PSMB10P40306 273 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 EFNA5P52803 228 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 SNX16P57768 344 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 EFNB1P98172 346 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 EPS8Q12929 822 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 METTL2BQ6P1Q9 378 aaKnown RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 APLFQ8IW19 511 aaPredicted RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 FAM9BQ8IZU0 186 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 CNTROBQ8N137 903 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 SPATA6LQ8N4H0 392 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 PLD5Q8N7P1 536 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 PIGTQ969N2 578 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 FAM149B1Q96BN6 582 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 SCRN2Q96FV2 425 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 METTL2AQ96IZ6 378 aaKnown RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 LRR1Q96L50 414 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 FTOQ9C0B1 505 aaKnown RBP eCLIP4.71□□□□□ -1.66
SENP6-206ENST00000474906 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 UPF2Q9HAU5 1272 aaKnown RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 BRF2Q9HAW0 419 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 GPR108Q9NPR9 543 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 CFDP1Q9UEE9 299 aaPredicted RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 RPS6KA6Q9UK32 745 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 NOL7Q9UMY1 257 aaKnown RBP4.71□□□□□ -1.66
SENP6-206ENST00000474906 FAM96BQ9Y3D0 163 aa4.71□□□□□ -1.66
SENP6-206ENST00000474906 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 A0A1W2PRQ8 180 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 NPIPB15A6NHN6 443 aaPredicted RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 P4HA2O15460 535 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 URODP06132 367 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 IRF1P10914 325 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 AKR1B1P15121 316 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 ZNF10P21506 573 aaPredicted RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 CHRNB4P30926 498 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 CPOXP36551 454 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 GSTA3Q16772 222 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 WDR38Q5JTN6 314 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 GPR139Q6DWJ6 353 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 SLC30A6Q6NXT4 461 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 CDC73Q6P1J9 531 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 TMEM81Q6P7N7 255 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 FAM171BQ6P995 826 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 SARM1Q6SZW1 724 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 C15orf39Q6ZRI6 1047 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 GTSCR1Q86UQ5 136 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 STPG4Q8N801 248 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 HUS1BQ8NHY5 278 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 ARHGEF2Q92974 986 aaKnown RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 EGFL8Q99944 293 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 SLF1Q9BQI6 1058 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 DCTN5Q9BTE1 182 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 USP44Q9H0E7 712 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 TTYH1Q9H313 450 aaPredicted RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 NDST4Q9H3R1 872 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 TFB2MQ9H5Q4 396 aaKnown RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 KAT14Q9H8E8 782 aa4.7□□□□□ -1.66
SENP6-206ENST00000474906 TTC7AQ9ULT0 858 aaPredicted RBP4.7□□□□□ -1.66
SENP6-206ENST00000474906 FAM170AA1A519 330 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 LIPT2A6NK58 231 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 LRRC53A6NM62 1247 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 PRKNO60260 465 aaPredicted RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 DKC1O60832 514 aaKnown RBP eCLIP4.69□□□□□ -1.66
SENP6-206ENST00000474906 MLYCDO95822 493 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 COPB2P35606 906 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 LMAN1P49257 510 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 LUMP51884 338 aaPredicted RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 LMO4P61968 165 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 DPCR1Q3MIW9 517 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 NCEH1Q6PIU2 408 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 CPLX2Q6PUV4 134 aaKnown RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 ANKRD23Q86SG2 305 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 TDRPQ86YL5 185 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 LYG1Q8N1E2 194 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 C17orf53Q8N3J3 647 aaPredicted RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 FRMD1Q8N878 549 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 TRIM58Q8NG06 486 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 STAMBPL1Q96FJ0 436 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 CCDC34Q96HJ3 373 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 ATOH8Q96SQ7 321 aa4.69□□□□□ -1.66
SENP6-206ENST00000474906 BAG1Q99933 345 aaPredicted RBP4.69□□□□□ -1.66
SENP6-206ENST00000474906 NCAPGQ9BPX3 1015 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms