RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DOK6Q6PKX4 331 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 AFTPHQ6ULP2 937 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 CERS6Q6ZMG9 384 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 MPP5Q8N3R9 675 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 MMGT1Q8N4V1 131 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 OR4L1Q8NH43 312 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 CNDP2Q96KP4 475 aaKnown RBP16.71■□□□□ 0.27
SCAF11-206ENST00000474828 ARFGAP3Q9NP61 516 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 WHRNQ9P202 907 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 GULP1Q9UBP9 304 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 FTSJ1Q9UET6 329 aa16.71■□□□□ 0.27
SCAF11-206ENST00000474828 CNOT1A5YKK6 2376 aaKnown RBP16.7■□□□□ 0.26
SCAF11-206ENST00000474828 ZCWPW2A0A1B0GU75 182 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 E7ESA3 106 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 NOBOXO60393 691 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 MTX2O75431 263 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 GOT2P00505 430 aaKnown RBP16.7■□□□□ 0.26
SCAF11-206ENST00000474828 GP1BAP07359 652 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 NMBRP28336 390 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 CTSCP53634 463 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 DBN1Q16643 649 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 DEFB133Q30KQ1 61 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 LYPLAL1Q5VWZ2 237 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 WASH2PQ6VEQ5 465 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 LRRTM4Q86VH4 590 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 SERPINA9Q86WD7 417 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 SLC35F3Q8IY50 421 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 ARL10Q8N8L6 244 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 BBOF1Q8ND07 529 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 GPR150Q8NGU9 434 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 LRRC39Q96DD0 335 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 MFSD3Q96ES6 412 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 COPS8Q99627 209 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 NAT9Q9BTE0 207 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 WASH6PQ9NQA3 447 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
SCAF11-206ENST00000474828 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 TAAR2Q9P1P5 351 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 SLC23A2Q9UGH3 650 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 ZNHIT2Q9UHR6 403 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 WASF3Q9UPY6 502 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 PLEKHM1Q9Y4G2 1056 aa16.7■□□□□ 0.26
SCAF11-206ENST00000474828 EME2A4GXA9 379 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 GOLGA8MH3BSY2 632 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 FFAR2O15552 330 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 USP1O94782 785 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 PRSS56P0CW18 603 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 CDK4P11802 303 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 ZNF7P17097 686 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 ITGA8P53708 1063 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 HLTFQ14527 1009 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 ANKRD20A4Q4UJ75 823 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 MSS51Q4VC12 460 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 PPM1JQ5JR12 505 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 FNBP1LQ5T0N5 605 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 MARK2Q7KZI7 788 aaKnown RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 TAF8Q7Z7C8 310 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 MNS1Q8NEH6 495 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 CCDC97Q96F63 343 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 FCRL3Q96P31 734 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-206ENST00000474828 PHACTR1Q9C0D0 580 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 PLAC1Q9HBJ0 212 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 CRLS1Q9UJA2 301 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 MOSPD1Q9UJG1 213 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 NCOR2Q9Y618 2525 aa16.69■□□□□ 0.26
SCAF11-206ENST00000474828 TDRD6O60522 2096 aaKnown RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 C17orf113A0A1B0GUU1 675 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 OR51F1A6NGY5 319 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 AP2A2O94973 939 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 GSTM1P09488 218 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 ATP1B2P14415 290 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 MSH3P20585 1137 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 AK4P27144 223 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 NSG1P42857 185 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 PRLHRP49683 370 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 DUSP3P51452 185 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 GSTM4Q03013 218 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 FRG1Q14331 258 aaKnown RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 SEMA3AQ14563 771 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 NR1D2Q14995 579 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 TYSND1Q2T9J0 566 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 ZRANB3Q5FWF4 1079 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 AGAP9Q5VTM2 703 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 ABRAXAS1Q6UWZ7 409 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 ZNF438Q7Z4V0 828 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 NAGSQ8N159 534 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 FAM46DQ8NEK8 389 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 OR6C4Q8NGE1 309 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 EBNA1BP2Q99848 306 aaKnown RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 WDR83Q9BRX9 315 aaKnown RBP16.68■□□□□ 0.26
SCAF11-206ENST00000474828 FAM96AQ9H5X1 160 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 L2HGDHQ9H9P8 463 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms