RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TUBB4AP04350 444 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 MLNP12872 115 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 GLB1P16278 677 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 IDSP22304 550 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 MGAT1P26572 445 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 MAGEA6P43360 314 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 PPM1FP49593 454 aaPredicted RBP13.56□□□□□ -0.24
USF1-205ENST00000473969 PTK6Q13882 451 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
USF1-205ENST00000473969 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
USF1-205ENST00000473969 FNBP1LQ5T0N5 605 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 AMZ2Q86W34 360 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 MCUQ8NE86 351 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 CPT1BQ92523 772 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 SLCO2A1Q92959 643 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 HDAC10Q969S8 669 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 VPS37BQ9H9H4 285 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 CHRAC1Q9NRG0 131 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 ZDHHC3Q9NYG2 299 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
USF1-205ENST00000473969 DNMT3AQ9Y6K1 912 aaPredicted RBP13.56□□□□□ -0.24
USF1-205ENST00000473969 TRBV23OR9-2A0A075B6M9 112 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 LY6G6EA0A0G2JKS1 128 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 TCRBV7S3A2A0A539 114 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 MAGEB16A2A368 324 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 AGAP14A8MT82 685 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 PDZK1P1A8MUH7 402 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 GOLGA8MH3BSY2 632 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 NUDT21O43809 227 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 OPA1O60313 960 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 POP7O75817 140 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 PNLIPP16233 465 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 PAMP19021 973 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 CLCNKAP51800 687 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 SHC2P98077 582 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 DHX34Q14147 1143 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
USF1-205ENST00000473969 SMAD1Q15797 465 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 KCTD19Q17RG1 926 aaPredicted RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 ARMC3Q5W041 872 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 ZNF449Q6P9G9 518 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 TMPRSS7Q7RTY8 843 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 MAATS1Q7Z4T9 603 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 SLC9B2Q86UD5 537 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 RASGEF1AQ8N9B8 481 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 OR4L1Q8NH43 312 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 CCDC74AQ96AQ1 378 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 SGF29Q96ES7 293 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 KRT12Q99456 494 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 MRM3Q9HC36 420 aaKnown RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 NEU2Q9Y3R4 380 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 NEUROG3Q9Y4Z2 214 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
USF1-205ENST00000473969 U3KQA8 63 aa13.55□□□□□ -0.24
USF1-205ENST00000473969 KIR2DS5A0A0G2JLQ3 304 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 A0A0G2JNG1 304 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 CCDC162PA2VCL2 907 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 KIR2DS3K7RE56 304 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 DNALI1O14645 258 aaPredicted RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 NDC80O14777 642 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 PFDN6O15212 129 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 URI1O94763 535 aaPredicted RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 MT-CO3P00414 261 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 GOT2P00505 430 aaKnown RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 F3P13726 295 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 SPINK2P20155 84 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 PSMA3P25788 255 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 ACRV1P26436 265 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 HALP42357 657 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 ARSDP51689 593 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 MAZP56270 477 aaKnown RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 CRADDP78560 199 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 CKAP4Q07065 602 aaKnown RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 SPIDRQ14159 915 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 ITIH4Q14624 930 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 KIR2DS5Q14953 304 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 ANKRD22Q5VYY1 191 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 JAMLQ86YT9 394 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 TRIM48Q8IWZ4 208 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 NAGSQ8N159 534 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 ARL14Q8N4G2 192 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 OTUD6BQ8N6M0 293 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 Q8N9G6 341 aaPredicted RBP13.54□□□□□ -0.24
USF1-205ENST00000473969 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 SH3KBP1Q96B97 665 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms