RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 MGAT3Q09327 533 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CBX3Q13185 183 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 KCNJ11Q14654 390 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SPANXN3Q5MJ09 141 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 FNBP1LQ5T0N5 605 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SEL1L3Q68CR1 1132 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PKN3Q6P5Z2 889 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MILR1Q7Z6M3 343 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF605Q86T29 641 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TMEM110Q86TL2 294 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SATL1Q86VE3 508 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PTRH1Q86Y79 214 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MIB1Q86YT6 1006 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZBTB8OSQ8IWT0 167 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TRIM48Q8IWZ4 208 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MAML2Q8IZL2 1156 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 NLGN4XQ8N0W4 816 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SIX6OS1Q8N1H7 587 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CISD2Q8N5K1 135 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MRPL43Q8N983 215 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZBTB44Q8NCP5 570 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 DQX1Q8TE96 717 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 S100ZQ8WXG8 99 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZCCHC14Q8WYQ9 949 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 KAT5Q92993 513 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ABTB1Q969K4 478 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CFAP36Q96G28 342 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 DUS3LQ96G46 650 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SERAC1Q96JX3 654 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 FAM167AQ96KS9 214 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 DIRC2Q96SL1 478 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 DDX50Q9BQ39 737 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF670Q9BS34 389 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 APOL6Q9BWW8 343 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CALN1Q9BXU9 219 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 UNKQ9C0B0 810 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 FAM49AQ9H0Q0 323 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 AGO3Q9H9G7 860 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 LRRC4Q9HBW1 653 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PXMP2Q9NR77 195 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ETNK2Q9NVF9 386 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SPG21Q9NZD8 308 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ARMCX1Q9P291 453 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ARHGAP28Q9P2N2 729 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ASH2LQ9UBL3 628 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 B4GALT6Q9UBX8 382 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 IPO11Q9UI26 975 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TLK1Q9UKI8 766 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 DNAJC16Q9Y2G8 782 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF510Q9Y2H8 683 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 RAP2CQ9Y3L5 183 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 FADS3Q9Y5Q0 445 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 AP4B1Q9Y6B7 739 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SLC30A1Q9Y6M5 507 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ACACBO00763 2458 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 RIF1Q5UIP0 2472 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CHD8Q9HCK8 2581 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ATG2AQ2TAZ0 1938 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 GREB1LQ9C091 1923 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TEX51A0A1B0GUA7 166 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 MYOCOSA0A1B0GUC4 107 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 SAC3D1A6NKF1 404 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF839A8K0R7 811 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 BBIP1A8MTZ0 92 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 F8VP50 259 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TRIM38O00635 465 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 VILLO15195 856 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 KCNN4O15554 427 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 ITM2AO43736 263 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 PLIN3O60664 434 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 RFPL1O75677 317 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 CXCL14O95715 111 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TRUB2O95900 331 aaKnown RBP4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TFAP2AP05549 437 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 PYGLP06737 847 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 APRTP07741 180 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TGFB3P10600 412 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 KITP10721 976 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 VDRP11473 427 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 CDK4P11802 303 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 GLULP15104 373 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 EPCAMP16422 314 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 CDH2P19022 906 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-214ENST00000473177 GPD1P21695 349 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TGM1P22735 817 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 SLC7A1P30825 629 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 PBX3P40426 434 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 PSMD8P48556 350 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 SERPINB10P48595 397 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 NPY2RP49146 381 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 TMED10P49755 219 aaKnown RBP4.89□□□□□ -1.63
LRCH3-214ENST00000473177 CSE1LP55060 971 aaKnown RBP4.89□□□□□ -1.63
LRCH3-214ENST00000473177 AQP4P55087 323 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 NME5P56597 212 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 C21orf59P57076 290 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 PHEXP78562 749 aa4.89□□□□□ -1.63
LRCH3-214ENST00000473177 SRSF3P84103 164 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms