RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PIANPQ8IYJ0 282 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 MPP5Q8N3R9 675 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 KYQ8NBH2 561 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 SPATA4Q8NEY3 305 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 ZNF398Q8TD17 642 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 PATE1Q8WXA2 126 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 CDKN2AIPNLQ96HQ2 116 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 TRIM39Q9HCM9 518 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 RAD18Q9NS91 495 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 SMOXQ9NWM0 555 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 TRNAU1APQ9NX07 287 aaKnown RBP12.96□□□□□ -0.33
TPM3-216ENST00000473036 VPS18Q9P253 973 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 PIKFYVEQ9Y2I7 2098 aa12.96□□□□□ -0.33
TPM3-216ENST00000473036 KNTC1P50748 2209 aa12.96□□□□□ -0.34
TPM3-216ENST00000473036 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
TPM3-216ENST00000473036 NEMP2A6NFY4 417 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 H7C0S8 307 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 NOBOXO60393 691 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 GAS8O95995 478 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CKMT1AP12532 417 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CTSEP14091 401 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CKMT2P17540 419 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 ACP1P24666 158 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 MC4RP32245 332 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CTSCP53634 463 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
TPM3-216ENST00000473036 TMEM115Q12893 351 aaPredicted RBP12.95□□□□□ -0.34
TPM3-216ENST00000473036 NFATC2Q13469 925 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 SEPT6Q14141 434 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 ELOCQ15369 112 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 PERM1Q5SV97 790 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 ZCCHC8Q6NZY4 707 aaKnown RBP12.95□□□□□ -0.34
TPM3-216ENST00000473036 GUSBP11Q6P575 273 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 OGFOD3Q6PK18 319 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 SLC30A9Q6PML9 568 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 KLHL7Q8IXQ5 586 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 NAT8LQ8N9F0 302 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 DNAAF3Q8N9W5 541 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 DDHD1Q8NEL9 900 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 GPR156Q8NFN8 814 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 RANBP9Q96S59 729 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 C19orf43Q9BQ61 176 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 ASB8Q9H765 288 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 SYBUQ9NX95 663 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 SIRPGQ9P1W8 387 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 GULP1Q9UBP9 304 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 ZNHIT2Q9UHR6 403 aa12.95□□□□□ -0.34
TPM3-216ENST00000473036 TRBV5-4A0A0C4DH59 114 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 A6NCN8 305 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 ANXA6P08133 673 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 MGAT1P26572 445 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 MAGEA3P43357 314 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 ACVR1Q04771 509 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 PTK6Q13882 451 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 DHX34Q14147 1143 aaKnown RBP12.94□□□□□ -0.34
TPM3-216ENST00000473036 TSTD2Q5T7W7 516 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 RNASEH2BQ5TBB1 312 aaKnown RBP12.94□□□□□ -0.34
TPM3-216ENST00000473036 ZDHHC20Q5W0Z9 365 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 LRRC8BQ6P9F7 803 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 LVRNQ6Q4G3 990 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
TPM3-216ENST00000473036 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
TPM3-216ENST00000473036 TRIM51Q9BSJ1 452 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 DUSP23Q9BVJ7 150 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 GPR34Q9UPC5 381 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 TCAF1Q9Y4C2 921 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 PCDHGA1Q9Y5H4 931 aa12.94□□□□□ -0.34
TPM3-216ENST00000473036 UNC13CQ8NB66 2214 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 EME2A4GXA9 379 aaPredicted RBP12.93□□□□□ -0.34
TPM3-216ENST00000473036 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 TTI1O43156 1089 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 GRID2O43424 1007 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 SLU7O95391 586 aaKnown RBP12.93□□□□□ -0.34
TPM3-216ENST00000473036 ECEL1O95672 775 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 ALPPL2P10696 532 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 ACP5P13686 325 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 ADRA1DP25100 572 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 ARNTP27540 789 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 NMBRP28336 390 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 FOXN2P32314 431 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms