RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CATSPERZQ9NTU4 200 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 NLGN3Q9NZ94 848 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 DMGDHQ9UI17 866 aaKnown RBP19.74■□□□□ 0.75
SF1-213ENST00000472725 COL5A1P20908 1838 aaPredicted RBP19.74■□□□□ 0.75
SF1-213ENST00000472725 ASCC3Q8N3C0 2202 aaKnown RBP19.74■□□□□ 0.75
SF1-213ENST00000472725 ZCWPW2A0A1B0GU75 182 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 CD3EAPO15446 510 aaKnown RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 GPR39O43194 453 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 AP2A2O94973 939 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 GSTM1P09488 218 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 NSG1P42857 185 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 ARCN1P48444 511 aaKnown RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 CLCNKAP51800 687 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 GSTM4Q03013 218 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 PDIA2Q13087 525 aaKnown RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 FRG1Q14331 258 aaKnown RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 LONRF1Q17RB8 773 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 PSAPL1Q6NUJ1 521 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 SDCCAG8Q86SQ7 713 aaPredicted RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 PIANPQ8IYJ0 282 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.73■□□□□ 0.75
SF1-213ENST00000472725 OR4C6Q8NH72 309 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 FBXO25Q8TCJ0 367 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 CALML6Q8TD86 181 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 LMX1AQ8TE12 382 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 TIMM29Q9BSF4 260 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 RTKNQ9BST9 563 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 TCEAL2Q9H3H9 227 aaPredicted RBP19.73■□□□□ 0.75
SF1-213ENST00000472725 ZNHIT2Q9UHR6 403 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 FRYLO94915 3013 aa19.73■□□□□ 0.75
SF1-213ENST00000472725 OR51F1A6NGY5 319 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 TM4SF5O14894 197 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 SDC3O75056 442 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 ANXA6P08133 673 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 ATP1B2P14415 290 aaPredicted RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 OGNP20774 298 aaKnown RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 CSRP1P21291 193 aaKnown RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 ARNTP27540 789 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 CA5AP35218 305 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 ELK3P41970 407 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 IL9RQ01113 521 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 CUL1Q13616 776 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 DBN1Q16643 649 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 BCL7AQ4VC05 210 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 KHDC1Q4VXA5 237 aaKnown RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 RNF187Q5TA31 235 aaPredicted RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 KCTD16Q68DU8 428 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 ZDHHC24Q6UX98 284 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 PIP4P1Q86T03 277 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 GATAD2AQ86YP4 633 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 NAXDQ8IW45 347 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 RASGEF1AQ8N9B8 481 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 FCRL3Q96P31 734 aaPredicted RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 CLPBQ9H078 707 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 TMEM168Q9H0V1 697 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 FAM96AQ9H5X1 160 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 NCKIPSDQ9NZQ3 722 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 MTRF1LQ9UGC7 380 aaKnown RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 ZC3H7BQ9UGR2 993 aaKnown RBP19.72■□□□□ 0.75
SF1-213ENST00000472725 DOLKQ9UPQ8 538 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 VPS9D1Q9Y2B5 631 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 GPSM3Q9Y4H4 160 aa19.72■□□□□ 0.75
SF1-213ENST00000472725 MTX2O75431 263 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 ZNF7P17097 686 aaPredicted RBP19.71■□□□□ 0.75
SF1-213ENST00000472725 VCLP18206 1134 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 CDKN1CP49918 316 aaPredicted RBP19.71■□□□□ 0.75
SF1-213ENST00000472725 CRYMQ14894 314 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 STEAP4Q687X5 459 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 NEPROQ6NW34 567 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 CES3Q6UWW8 571 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 MARK2Q7KZI7 788 aaKnown RBP19.71■□□□□ 0.75
SF1-213ENST00000472725 IFT20Q8IY31 132 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 FAM181AQ8N9Y4 354 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 LINC00615Q96LM1 132 aaPredicted RBP19.71■□□□□ 0.75
SF1-213ENST00000472725 CDC6Q99741 560 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 SLC32A1Q9H598 525 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 VPS37BQ9H9H4 285 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 ARFGAP3Q9NP61 516 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 ZDHHC18Q9NUE0 388 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 EVA1BQ9NVM1 165 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 UCKL1Q9NWZ5 548 aa19.71■□□□□ 0.75
SF1-213ENST00000472725 ZFC3H1O60293 1989 aaKnown RBP19.71■□□□□ 0.75
SF1-213ENST00000472725 ESYT3A0FGR9 886 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 YY2O15391 372 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 GSTA2P09210 222 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 GIMD1P0DJR0 217 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 PMLP29590 882 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 B4GALNT1Q00973 533 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 CTBSQ01459 385 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 DMPKQ09013 629 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 THOC5Q13769 683 aaKnown RBP19.7■□□□□ 0.74
SF1-213ENST00000472725 TYSND1Q2T9J0 566 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 ZNF648Q5T619 568 aaPredicted RBP19.7■□□□□ 0.74
SF1-213ENST00000472725 ZCCHC8Q6NZY4 707 aaKnown RBP19.7■□□□□ 0.74
SF1-213ENST00000472725 TMEM220Q6QAJ8 160 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 TAF8Q7Z7C8 310 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 LRRC6Q86X45 466 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 TRAPPC5Q8IUR0 188 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 ZNF547Q8IVP9 402 aa19.7■□□□□ 0.74
SF1-213ENST00000472725 ZBED8Q8IZ13 594 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms