RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 VEGFDO43915 354 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 PMPCBO75439 489 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 SASH3O75995 380 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 APOC2P02655 101 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 LIPCP11150 499 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 F3P13726 295 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 HGFP14210 728 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 ITIH1P19827 911 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 EPHA4P54764 986 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 HHEXQ03014 270 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 ADCY2Q08462 1091 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 MPP3Q13368 585 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 COL9A2Q14055 689 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 IYDQ6PHW0 289 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 CCDC81Q6ZN84 652 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 PID1Q7Z2X4 250 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 PHYKPLQ8IUZ5 450 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 CCDC50Q8IVM0 306 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 RNF10Q8N5U6 811 aaKnown RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 OR10G6Q8NH81 332 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 AHCYL2Q96HN2 611 aaKnown RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 NUDT22Q9BRQ3 303 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 EPB41L1Q9H4G0 881 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 CPNE5Q9HCH3 593 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-211ENST00000471260 PDP2Q9P2J9 529 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 ATXN10Q9UBB4 475 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 RNF14Q9UBS8 474 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 SCN8AQ9UQD0 1980 aa13.34□□□□□ -0.27
HMGN1-211ENST00000471260 AHCTF1Q8WYP5 2266 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 A6NCN8 305 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 KMOO15229 486 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 DUX1O43812 170 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PPFIA2O75334 1257 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PIRTP0C851 137 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ACP5P13686 325 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF8P17098 575 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 BPIP17213 487 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 HLA-DPA1P20036 260 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 CTNNA1P35221 906 aaKnown RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 WNT3AP56704 352 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 C16orf72Q14CZ0 275 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 WDR74Q6RFH5 385 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 KDELC1Q6UW63 502 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ADGRG6Q86SQ4 1221 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 AGBL5Q8NDL9 886 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 BRSK1Q8TDC3 778 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 QKIQ96PU8 341 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 OR2AG1Q9H205 316 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 UCK1Q9HA47 277 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 UBP1Q9NZI7 540 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 TBC1D29Q9UFV1 150 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PRKAB1Q9Y478 270 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PCDHA3Q9Y5H8 950 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PCYT1BQ9Y5K3 369 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-211ENST00000471260 IGSF10Q6WRI0 2623 aa13.33□□□□□ -0.28
HMGN1-211ENST00000471260 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 KCNJ13O60928 360 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 CDK14O94921 469 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 THRAP10827 490 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 NFKB1P19838 968 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 CSTF2P33240 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGN1-211ENST00000471260 PTPN7P35236 360 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 CETN2P41208 172 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 C19orf57Q0VDD7 668 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 SLC1A5Q15758 541 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 LRRTM4Q86VH4 590 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 KRT35Q92764 455 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 USP7Q93009 1102 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 MRGPRX2Q96LB1 330 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 TIMM29Q9BSF4 260 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-211ENST00000471260 KCNK6Q9Y257 313 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 PCDHGA3Q9Y5H0 932 aa13.32□□□□□ -0.28
HMGN1-211ENST00000471260 TRBV23OR9-2A0A075B6M9 112 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 A0A0U1RQJ8 604 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 LILRA5A6NI73 299 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 B4E171 279 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 C9orf172C9J069 976 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 ANXA9O76027 345 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms