RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SGCGQ13326 291 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 ACAP2Q15057 778 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 N4BP2L1Q5TBK1 243 aaPredicted RBP14.96□□□□□ -0.01
COL4A5-203ENST00000470339 PNCKQ6P2M8 343 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 KLC3Q6P597 504 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 TRIM67Q6ZTA4 783 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 HORMAD1Q86X24 394 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 GJD3Q8N144 294 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 SPEM1Q8N4L4 309 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 PJA1Q8NG27 643 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 OR2T34Q8NGX1 318 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 RDH11Q8TC12 318 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 MGARPQ8TDB4 240 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 INPP5DQ92835 1189 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 PDLIM5Q96HC4 596 aaKnown RBP14.96□□□□□ -0.01
COL4A5-203ENST00000470339 MAGEB18Q96M61 343 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 GPR78Q96P69 363 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 TSSK1BQ9BXA7 367 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 SLC17A9Q9BYT1 436 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 FOXQ1Q9C009 403 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 ZCCHC2Q9C0B9 1178 aaKnown RBP14.96□□□□□ -0.01
COL4A5-203ENST00000470339 CHRDQ9H2X0 955 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 NMRAL1Q9HBL8 299 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 TMEM216Q9P0N5 145 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 TRMT6Q9UJA5 497 aaKnown RBP14.96□□□□□ -0.01
COL4A5-203ENST00000470339 EMCNQ9ULC0 261 aa14.96□□□□□ -0.01
COL4A5-203ENST00000470339 TBC1D3DA0A087WVF3 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3IA0A087WXS9 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3EA0A087X179 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3KA0A087X1G2 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 A0A1W2PQU0 124 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3FA6NER0 549 aaPredicted RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 LRRC72A6NJI9 287 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 C10orf142B7Z368 130 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3LB9A6J9 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 KPNA5O15131 536 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 NIPSNAP2O75323 286 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 RBP1P09455 135 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3HP0C7X1 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 AKT1P31749 480 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 LSP1P33241 339 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 SERPINB4P48594 390 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 ATP6V0D1P61421 351 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 GNGT1P63211 74 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 GAS6Q14393 721 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 ZNF460Q14592 562 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 LRRC14Q15048 493 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 PDK4Q16654 411 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 WSCD2Q2TBF2 565 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3GQ6DHY5 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 RAET1GQ6H3X3 334 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3CQ6IPX1 549 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 PAQR3Q6TCH7 311 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TMEM207Q6UWW9 146 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 RGS9BPQ6ZS82 235 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 PIM3Q86V86 326 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TRIM69Q86WT6 500 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TRIM42Q8IWZ5 723 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TBC1D3Q8IZP1 549 aaPredicted RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 CLDN19Q8N6F1 224 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 CD200R1Q8TD46 325 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 KCTD4Q8WVF5 259 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 HMGB4Q8WW32 186 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 NXNL1Q96CM4 212 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 HIC2Q96JB3 615 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 GPR21Q99679 349 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 MRPL57Q9BQC6 102 aaKnown RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 FAM126AQ9BYI3 521 aaPredicted RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 DERL2Q9GZP9 239 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 BTBD1Q9H0C5 482 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 TRIM39Q9HCM9 518 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 IGSF5Q9NSI5 407 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 SPATS2LQ9NUQ6 558 aaKnown RBP14.95□□□□□ -0.02
COL4A5-203ENST00000470339 EBF1Q9UH73 591 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 PRSS21Q9Y6M0 314 aa14.95□□□□□ -0.02
COL4A5-203ENST00000470339 EIF3FO00303 357 aaPredicted RBP14.94□□□□□ -0.02
COL4A5-203ENST00000470339 RRP9O43818 475 aaKnown RBP14.94□□□□□ -0.02
COL4A5-203ENST00000470339 VEGFDO43915 354 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TOP3BO95985 862 aaKnown RBP14.94□□□□□ -0.02
COL4A5-203ENST00000470339 GSTM1P09488 218 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 CBSLP0DN79 551 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 CBSP35520 551 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TRIM23P36406 574 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 MAGEA9P43362 315 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 IL2P60568 153 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 ZXDAP98168 799 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 GSTM4Q03013 218 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TMEM115Q12893 351 aaPredicted RBP14.94□□□□□ -0.02
COL4A5-203ENST00000470339 DLG1Q12959 904 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 SEL1L3Q68CR1 1132 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 C16orf46Q6P387 395 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 MAMSTRQ6ZN01 415 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TAX1BP1Q86VP1 789 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 PGBD3Q8N328 593 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TP53I13Q8NBR0 393 aaPredicted RBP14.94□□□□□ -0.02
COL4A5-203ENST00000470339 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 TSTD1Q8NFU3 115 aa14.94□□□□□ -0.02
COL4A5-203ENST00000470339 RAB3IL1Q8TBN0 382 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms