RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PACS1Q6VY07 963 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SLCO6A1Q86UG4 719 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 LRRTM4Q86VH4 590 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SERPINA9Q86WD7 417 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SFTPA2Q8IWL1 248 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 GPR156Q8NFN8 814 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 HDAC10Q969S8 669 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SNF8Q96H20 258 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SPATS2LQ9NUQ6 558 aaKnown RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 ZDHHC3Q9NYG2 299 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 CRLS1Q9UJA2 301 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 MOSPD1Q9UJG1 213 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 GPR34Q9UPC5 381 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 PLEKHM1Q9Y4G2 1056 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SLC30A1Q9Y6M5 507 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 ARHGEF17Q96PE2 2063 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 FAM237BA0A1B0GVD1 139 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 B4DGG1 531 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 SMAPO00193 183 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 KMOO15229 486 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 URI1O94763 535 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 GOT2P00505 430 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 GP1BAP07359 652 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ACP5P13686 325 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 NMBRP28336 390 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 AKT1P31749 480 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ACTR1BP42025 376 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ARCN1P48444 511 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 PRLHRP49683 370 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ACTR1AP61163 376 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 CBLBQ13191 982 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ILKQ13418 452 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 TUBB2AQ13885 445 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 GTF2H3Q13889 308 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 HLTFQ14527 1009 aaKnown RBP eCLIP10.89□□□□□ -0.67
MSH5-212ENST00000467319 ITIH4Q14624 930 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 NR0B2Q15466 257 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ZRANB3Q5FWF4 1079 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 N4BP2L1Q5TBK1 243 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 KIAA0930Q6ICG6 404 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 GUSBP11Q6P575 273 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 SLC30A9Q6PML9 568 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ZNF438Q7Z4V0 828 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 PCGF5Q86SE9 256 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 TRAPPC5Q8IUR0 188 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 FAM46DQ8NEK8 389 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 GDAP1Q8TB36 358 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 HEXDCQ8WVB3 486 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 SCG3Q8WXD2 468 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 MFSD3Q96ES6 412 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ZNF514Q96K75 400 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 SIGLEC10Q96LC7 697 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 LINC00615Q96LM1 132 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 COPS8Q99627 209 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 WDR83Q9BRX9 315 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 TRIM56Q9BRZ2 755 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 TUBB2BQ9BVA1 445 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 FAM96AQ9H5X1 160 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 GRHL1Q9NZI5 618 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 MARCH4Q9P2E8 410 aaPredicted RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 SLC23A2Q9UGH3 650 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ZNHIT2Q9UHR6 403 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
MSH5-212ENST00000467319 KCNK6Q9Y257 313 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 GPSM3Q9Y4H4 160 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 AKAP13Q12802 2813 aa10.89□□□□□ -0.67
MSH5-212ENST00000467319 ZCWPW2A0A1B0GU75 182 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 MED19A0JLT2 244 aaPredicted RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 EME2A4GXA9 379 aaPredicted RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 SDR42E2A6NKP2 422 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 EFCAB8A8MWE9 144 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 RFPL3O75679 317 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 EML2O95834 649 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 ADRB1P08588 477 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 MYF5P13349 255 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 MSH3P20585 1137 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 PMLP29590 882 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 RPIAP49247 311 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 PRAMEP78395 509 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 MRPS25P82663 173 aaKnown RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 NR1D2Q14995 579 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 TYSND1Q2T9J0 566 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 C14orf28Q4W4Y0 310 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 FNBP1LQ5T0N5 605 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 DUPD1Q68J44 220 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 CHST15Q7LFX5 561 aaPredicted RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 MAATS1Q7Z4T9 603 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 RAB44Q7Z6P3 723 aaPredicted RBP10.88□□□□□ -0.67
MSH5-212ENST00000467319 NAGSQ8N159 534 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 SFRP1Q8N474 314 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 OR4L1Q8NH43 312 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 KIF18AQ8NI77 898 aa10.88□□□□□ -0.67
MSH5-212ENST00000467319 ADAMTS14Q8WXS8 1223 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms