RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 WDR73Q6P4I2 378 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 DENND5BQ6ZUT9 1274 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCDC186Q7Z3E2 898 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 HAUS6Q7Z4H7 955 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 NKAIN3Q8N8D7 197 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 UTP15Q8TED0 518 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 SMG7Q92540 1137 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 RMDN1Q96DB5 314 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 DDOQ99489 341 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 MTERF1Q99551 399 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 PIH1D3Q9NQM4 214 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 SMARCAL1Q9NZC9 954 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 RCC2Q9P258 522 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 A0A1W2PRQ8 180 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 TRBC2A0A5B9 178 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 J3QR06 171 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PLPP2O43688 288 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 AFPP02771 609 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCDC175P0C221 793 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 KCNA5P22460 613 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PPP5CP53041 499 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 BNC1Q01954 994 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 EGR4Q05215 589 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF155Q12901 538 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 TRAF3Q13114 568 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 DHX34Q14147 1143 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 FAM98BQ52LJ0 330 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF534Q76KX8 674 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PLPPR4Q7Z2D5 763 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 ADIPOR2Q86V24 386 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 FJX1Q86VR8 437 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 RNF113BQ8IZP6 322 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PELI3Q8N2H9 469 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PGBD5Q8N414 524 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 SLC5A8Q8N695 610 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 IQCF1Q8N6M8 205 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 TANKQ92844 425 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PHF21BQ96EK2 531 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 SLC22A12Q96S37 553 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 CMKLR1Q99788 373 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 KLHL20Q9Y2M5 609 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PCDHAC2Q9Y5I4 1007 aa4.29□□□□□ -1.72
CDC42BPA-211ENST00000466538 PTPRCP08575 1304 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 LILRA5A6NI73 299 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 PROB1E7EW31 1015 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZBTB43O43298 467 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 TBCAO75347 108 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 KCNK5O95279 499 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 GGPS1O95749 300 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SCG2P13521 617 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SSTR2P30874 369 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 CLDN20P56880 219 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SEC61A1P61619 476 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ROR1Q01973 937 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 NR1D2Q14995 579 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ARMC4Q5T2S8 1044 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 LRCH2Q5VUJ6 765 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 CST9LP1Q5W188 147 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 CAMKMTQ7Z624 323 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 CEP57Q86XR8 500 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF34Q8IZ26 560 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 TC2NQ8N9U0 490 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF114Q8NC26 417 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 PAPD5Q8NDF8 572 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 OR2AK2Q8NG84 335 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 EXD1Q8NHP7 514 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 TAS1R2Q8TE23 839 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 ASB5Q8WWX0 329 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SPACA9Q96E40 222 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SCMH1Q96GD3 660 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 C3orf30Q96M34 536 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 HGH1Q9BTY7 390 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 MOV10L1Q9BXT6 1211 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 SEZ6LQ9BYH1 1024 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 EDEM3Q9BZQ6 932 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 GPR88Q9GZN0 384 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 MRPL44Q9H9J2 332 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 NOX4Q9NPH5 578 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 TMEM30AQ9NV96 361 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 HAO2Q9NYQ3 351 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 TAS2R14Q9NYV8 317 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 C5AR2Q9P296 337 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 WDR35Q9P2L0 1181 aa4.28□□□□□ -1.72
CDC42BPA-211ENST00000466538 A0A1W2PP11 408 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 DVL1O14640 695 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 SLC16A5O15375 505 aa4.27□□□□□ -1.73
CDC42BPA-211ENST00000466538 BUD23O43709 281 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms