RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TCTN1Q2MV58 587 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 Q4G0T1 1027 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 STXBP5Q5T5C0 1151 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 LRRC38Q5VT99 294 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ARMC3Q5W041 872 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 PPP1R2P3Q6NXS1 205 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 UGT2A3Q6UWM9 527 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CXCL17Q6UXB2 119 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 RPTNQ6XPR3 784 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 LIPIQ6XZB0 460 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 B3GNT6Q6ZMB0 384 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 LINC00299Q6ZSB3 139 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CENPUQ71F23 418 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 INTS8Q75QN2 995 aaKnown RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 NLRP9Q7RTR0 991 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 OTOAQ7RTW8 1153 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ADGRD2Q7Z7M1 963 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ADGRA1Q86SQ6 560 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CLEC14AQ86T13 490 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ZNF554Q86TJ5 538 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 HEATR4Q86WZ0 1026 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SFR1Q86XK3 245 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ARMC8Q8IUR7 673 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 KBTBD2Q8IY47 623 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ST13P4Q8IZP2 240 aaPredicted RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 DCBLD1Q8N8Z6 715 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 RBM15BQ8NDT2 890 aaKnown RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 PIK3C3Q8NEB9 887 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 FNDC8Q8TC99 324 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 TBCKQ8TEA7 893 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 FAM172AQ8WUF8 416 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 DYDC1Q8WWB3 177 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ST8SIA4Q92187 359 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SCAMP4Q969E2 229 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SNF8Q96H20 258 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 VPS50Q96JG6 964 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ZNF668Q96K58 619 aaPredicted RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 CNDP2Q96KP4 475 aaKnown RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 CFAP57Q96MR6 1250 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 FNBP1Q96RU3 617 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 FIZ1Q96SL8 496 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CGREF1Q99674 301 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 NUDT22Q9BRQ3 303 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.47□□□□□ -1.85
SORT1-202ENST00000466471 TDRD1Q9BXT4 1180 aaKnown RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 SLC2A11Q9BYW1 496 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 FRMD8P1Q9BZ68 369 aaPredicted RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 OSBPL8Q9BZF1 889 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SPATC1LQ9H0A9 340 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ST6GALNAC4Q9H4F1 302 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 DNAJC18Q9H819 358 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 MSL2Q9HCI7 577 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 PALMDQ9NP74 551 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 NDUFAF4Q9P032 175 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 JKAMPQ9P055 326 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 TUBGCP4Q9UGJ1 667 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 HAO1Q9UJM8 370 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CDH7Q9ULB5 785 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 RAB26Q9ULW5 256 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 C19orf53Q9UNZ5 99 aaPredicted RBP3.47□□□□□ -1.85
SORT1-202ENST00000466471 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 COQ4Q9Y3A0 265 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.47□□□□□ -1.85
SORT1-202ENST00000466471 TMED5Q9Y3A6 229 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 SQORQ9Y6N5 450 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 ZMYM2Q9UBW7 1377 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CRYBG3Q68DQ2 2970 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CELSR2Q9HCU4 2923 aa3.47□□□□□ -1.85
SORT1-202ENST00000466471 CACNA1DQ01668 2161 aa3.46□□□□□ -1.85
SORT1-202ENST00000466471 ASTN1O14525 1302 aa3.46□□□□□ -1.85
SORT1-202ENST00000466471 ICE1Q9Y2F5 2266 aa3.46□□□□□ -1.85
SORT1-202ENST00000466471 NIPBLQ6KC79 2804 aaeCLIP3.46□□□□□ -1.86
SORT1-202ENST00000466471 A0A087WZ62 844 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ARHGAP10A1A4S6 786 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SH3PXD2BA1X283 911 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 HMX3A6NHT5 357 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ANKRD63C9JTQ0 380 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 MATN2O00339 956 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CCNT1O60563 726 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 DKC1O60832 514 aaKnown RBP eCLIP3.46□□□□□ -1.86
SORT1-202ENST00000466471 RNASEH1O60930 286 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 CBFA2T3O75081 653 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ITGA10O75578 1167 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KRT36O76013 467 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ALDH1A2O94788 518 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KLHL18O94889 574 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TNFRSF6BO95407 300 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CBX6O95503 412 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SNAI1O95863 264 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 GH1P01241 217 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ASNSP08243 561 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SMIM18P0DKX4 95 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TROVE2P10155 538 aaKnown RBP eCLIP3.46□□□□□ -1.86
SORT1-202ENST00000466471 MYBL1P10243 752 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 GP1BBP13224 206 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 GLULP15104 373 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms