RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 BEND5Q7L4P6 421 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 DTWD1Q8N5C7 304 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 RNF34Q969K3 372 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 CCDC115Q96NT0 180 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 NSUN5Q96P11 429 aaKnown RBP19.56■□□□□ 0.72
SDF4-205ENST00000465727 TMEM209Q96SK2 561 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 AMBRA1Q9C0C7 1298 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SLC25A51Q9H1U9 297 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 PDGFCQ9NRA1 345 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 C3orf18Q9UK00 162 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ATP11BQ9Y2G3 1177 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 IFT52Q9Y366 437 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ISPDA4D126 451 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 MROH6A6NGR9 719 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SNX2O60749 519 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 INMTO95050 263 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ZNF37AP17032 561 aaPredicted RBP19.56■□□□□ 0.72
SDF4-205ENST00000465727 GGT1P19440 569 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 AKAP5P24588 427 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 RYKP34925 604 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 CASP2P42575 452 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 UFM1P61960 85 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 CDC42EP1Q00587 391 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SELENBP1Q13228 472 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 TIGD2Q4W5G0 525 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 PRAMEF18Q5VWM3 479 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 KDELC2Q7Z4H8 507 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ADCK1Q86TW2 530 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SPNS2Q8IVW8 549 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 PPTC7Q8NI37 304 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ZNF599Q96NL3 588 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SMOQ99835 787 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SLC39A8Q9C0K1 460 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SLAMF8Q9P0V8 285 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 USP22Q9UPT9 525 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 FAM92AA1XBS5 289 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 FAM47E-STBD1D6RA91 191 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 NADKO95544 446 aaPredicted RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 BMP4P12644 408 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 NR4A1P22736 598 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 SERPINB1P30740 379 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 SOX11P35716 441 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ISL1P61371 349 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 PRKG2Q13237 762 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 DNASE1L3Q13609 305 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 OR4D1Q15615 310 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 GPRIN1Q7Z2K8 1008 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 TAC4Q86UU9 113 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ZFAND4Q86XD8 727 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ATP6V0D2Q8N8Y2 350 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 OR6P1Q8NGX9 317 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 EDEM1Q92611 657 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 GORASP2Q9H8Y8 452 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 MOV10Q9HCE1 1003 aaKnown RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 SCUBE2Q9NQ36 999 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 OSER1Q9NX31 292 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 NYNRINQ9P2P1 1898 aaKnown RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 M0QX08 132 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 IFRD1O00458 451 aaPredicted RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 KERAO60938 352 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 KCNAB2Q13303 367 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 PCSK7Q16549 785 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 PGS1Q32NB8 556 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 RFX4Q33E94 735 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ZNF691Q5VV52 312 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ANKS6Q68DC2 871 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 ARMC8Q8IUR7 673 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 RYBPQ8N488 228 aaPredicted RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 FAR1Q8WVX9 515 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 TXNDC15Q96J42 360 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 NSMCE3Q96MG7 304 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 RNF19AQ9NV58 838 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 SMPD4Q9NXE4 827 aa19.55■□□□□ 0.72
SDF4-205ENST00000465727 MAGED1Q9Y5V3 778 aaPredicted RBP19.55■□□□□ 0.72
SDF4-205ENST00000465727 LRRC14BA6NHZ5 514 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 ARNTLO00327 626 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 NDST3O95803 873 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 UROSP10746 265 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 ACVR2AP27037 513 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 CD40LGP29965 261 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 PIGAP37287 484 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 GMPSP49915 693 aaPredicted RBP19.54■□□□□ 0.72
SDF4-205ENST00000465727 TPTEP56180 551 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 SOX4Q06945 474 aaPredicted RBP19.54■□□□□ 0.72
SDF4-205ENST00000465727 GRIK4Q16099 956 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 PAGE2BQ5JRK9 111 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 MARCH8Q5T0T0 291 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 LAIR2Q6ISS4 152 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 PRSS48Q7RTY5 328 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 ZMIZ2Q8NF64 920 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 STAG3L4Q8TBR4 150 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 RORBQ92753 470 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 TRIM62Q9BVG3 475 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 TPK1Q9H3S4 243 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 SPC25Q9HBM1 224 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 GOLGA2P5Q9HBQ8 144 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 PTCH2Q9Y6C5 1203 aa19.54■□□□□ 0.72
SDF4-205ENST00000465727 LOC100130705A0A1B0GUX0 176 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 ASB14A6NK59 587 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms