RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 EFCAB8A8MWE9 144 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A9O60656 530 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 SRP72O76094 671 aaKnown RBP20.6■□□□□ 0.89
CD58-204ENST00000464088 SEC31AO94979 1220 aaKnown RBP20.6■□□□□ 0.89
CD58-204ENST00000464088 RASGRP1O95267 797 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 PRAMEF1O95521 474 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 JUNDP17535 347 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 CKMT2P17540 419 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A6P19224 532 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A1P22309 533 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A4P22310 534 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A3P35503 534 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A5P35504 534 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 HK3P52790 923 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 RHDQ02161 417 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 MORF4L2Q15014 288 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 NLRP9Q7RTR0 991 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 AGGF1Q8N302 714 aaeCLIP20.6■□□□□ 0.89
CD58-204ENST00000464088 MPP5Q8N3R9 675 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 PPHLN1Q8NEY8 458 aaKnown RBP20.6■□□□□ 0.89
CD58-204ENST00000464088 ZNF398Q8TD17 642 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 SNF8Q96H20 258 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 TBATAQ96M53 351 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 ERP44Q9BS26 406 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 KIFC1Q9BW19 673 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 TRIM31Q9BZY9 425 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A7Q9HAW7 530 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A10Q9HAW8 530 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 UGT1A8Q9HAW9 530 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 MRM3Q9HC36 420 aaKnown RBP20.6■□□□□ 0.89
CD58-204ENST00000464088 CHRAC1Q9NRG0 131 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 SLC2A6Q9UGQ3 507 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 CLCA2Q9UQC9 943 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 TMEM98Q9Y2Y6 226 aa20.6■□□□□ 0.89
CD58-204ENST00000464088 PRSS38A1L453 326 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 SDC3O75056 442 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 IVLP07476 585 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 DGKAP23743 735 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 RPL21P46778 160 aaKnown RBP20.59■□□□□ 0.89
CD58-204ENST00000464088 POLD2P49005 469 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 HNRNPKP61978 463 aaKnown RBP eCLIP20.59■□□□□ 0.89
CD58-204ENST00000464088 ITGA9Q13797 1035 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 SKIDA1Q1XH10 827 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 KHDC1Q4VXA5 237 aaKnown RBP20.59■□□□□ 0.89
CD58-204ENST00000464088 ARMC3Q5W041 872 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 DUPD1Q68J44 220 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 HID1Q8IV36 788 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 SLC25A45Q8N413 288 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 MMGT1Q8N4V1 131 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 LRRC61Q9BV99 259 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 SUDS3Q9H7L9 328 aaPredicted RBP20.59■□□□□ 0.89
CD58-204ENST00000464088 TREX1Q9NSU2 369 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 UCKL1Q9NWZ5 548 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 VPS18Q9P253 973 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 APOBEC3BQ9UH17 382 aaKnown RBP20.59■□□□□ 0.89
CD58-204ENST00000464088 SNX24Q9Y343 169 aa20.59■□□□□ 0.89
CD58-204ENST00000464088 H3BM21 787 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 SMAPO00193 183 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 DNAJC6O75061 913 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 SLC25A14O95258 325 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 GIMD1P0DJR0 217 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ACP1P24666 158 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 MC4RP32245 332 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 BLKP51451 505 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ITGA8P53708 1063 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 INSM1Q01101 510 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 NFATC2Q13469 925 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 TAF1BQ53T94 588 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 ZNF648Q5T619 568 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 DOK6Q6PKX4 331 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ADGRG6Q86SQ4 1221 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 PHYKPLQ8IUZ5 450 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ZNF248Q8NDW4 579 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 MNS1Q8NEH6 495 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ZNF548Q8NEK5 533 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 SIGLEC10Q96LC7 697 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ASB8Q9H765 288 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 TRIM39Q9HCM9 518 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 CYP4F12Q9HCS2 524 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ARFGAP3Q9NP61 516 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 ATXN10Q9UBB4 475 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 SUFUQ9UMX1 484 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 SOX13Q9UN79 622 aa20.58■□□□□ 0.89
CD58-204ENST00000464088 PCYT1BQ9Y5K3 369 aaPredicted RBP20.58■□□□□ 0.89
CD58-204ENST00000464088 TRBV5-4A0A0C4DH59 114 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 CCDC162PA2VCL2 907 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 CTAGE15A4D2H0 777 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 SDR42E2A6NKP2 422 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 ESPNB1AK53 854 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 TNFP01375 233 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 CTAGE8P0CG41 777 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 NMBRP28336 390 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 UCNP55089 124 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 RD3Q7Z3Z2 195 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 SNX20Q7Z614 316 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 CTAGE6Q86UF2 777 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 CTAGE4Q8IX94 777 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 NOA1Q8NC60 698 aaKnown RBP20.57■□□□□ 0.88
CD58-204ENST00000464088 DDHD1Q8NEL9 900 aa20.57■□□□□ 0.88
CD58-204ENST00000464088 LRRC1Q9BTT6 524 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms