RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ADAM19Q9H013 955 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 PABPC3Q9H361 631 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 DHX35Q9H5Z1 703 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 FBRSQ9HAH7 460 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 USP29Q9HBJ7 922 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 ANLNQ9NQW6 1124 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 OR12D3Q9UGF7 316 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 SERGEFQ9UGK8 458 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 FZD10Q9ULW2 581 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 SNX12Q9UMY4 172 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 VPS4AQ9UN37 437 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MAPRE3Q9UPY8 281 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 TTLL3Q9Y4R7 772 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 SNX10Q9Y5X0 201 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 U3KQA8 63 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 HIVEP3Q5T1R4 2406 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SPG11Q96JI7 2443 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3DA0A087WVF3 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3IA0A087WXS9 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3EA0A087X179 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3KA0A087X1G2 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3FA6NER0 549 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TCAF2A6NFQ2 919 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CFAP73A6NFT4 308 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 NEMP2A6NFY4 417 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 BTNL10A8MVZ5 291 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3LB9A6J9 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 I6L893 689 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 EEF2KO00418 725 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 NDUFAB1O14561 156 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TNFRSF10CO14798 259 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PLD2O14939 933 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PJA2O43164 708 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 DAPK3O43293 454 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 OIP5O43482 229 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 KRT86O43790 486 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SPOPO43791 374 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CLDN1O95832 211 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 DDAH2O95865 285 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 RPSAP08865 295 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3HP0C7X1 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ALPPL2P10696 532 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ESRRAP11474 423 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 FOSL1P15407 271 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 NME1P15531 152 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TCF4P15884 667 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 COMTP21964 271 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 L1CAMP32004 1257 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 UGT1A5P35504 534 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 GJC1P36383 396 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC1A1P43005 524 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SGSHP51688 502 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 HADHBP55084 474 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TPI1P60174 286 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 GNGT1P63211 74 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC7A5Q01650 507 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 OVGP1Q12889 678 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF177Q13360 481 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 XRCC4Q13426 336 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 KRT81Q14533 505 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 STAT4Q14765 748 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 RCN1Q15293 331 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SEPT7Q16181 437 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CDKN3Q16667 212 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SMTNL2Q2TAL5 461 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 LACTB2Q53H82 288 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 BOLA3Q53S33 107 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ODF2Q5BJF6 829 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TTMPQ5BVD1 217 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF776Q68DI1 518 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3GQ6DHY5 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 THOC7Q6I9Y2 204 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3CQ6IPX1 549 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CRTC1Q6UUV9 634 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 UNC5AQ6ZN44 842 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC121Q6ZUS5 278 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 CHST9Q7L1S5 443 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TFAP2DQ7Z6R9 452 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 DAAM2Q86T65 1068 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PRPF39Q86UA1 669 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 IQCHQ86VS3 1027 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PSTKQ8IV42 348 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D3Q8IZP1 549 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PYROXD2Q8N2H3 581 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 FBXO39Q8N4B4 442 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ARFGAP1Q8N6T3 406 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF557Q8N988 423 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PPP1R14CQ8TAE6 165 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 C9orf43Q8TAL5 461 aaPredicted RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TRPC4APQ8TEL6 797 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 GIMAP1Q8WWP7 306 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 KLHL6Q8WZ60 621 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 MYEOVQ96EZ4 313 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 KLHDC7BQ96G42 594 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 EXOC2Q96KP1 924 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 GDAP1L1Q96MZ0 367 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 PEBP4Q96S96 227 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms