RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ARL4CP56559 192 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MRPS25P82663 173 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CTBSQ01459 385 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CAV1Q03135 178 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ITIH4Q14624 930 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TRIP6Q15654 476 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 HIF1AQ16665 826 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DEFB133Q30KQ1 61 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KHDC1Q4VXA5 237 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 GLE1Q53GS7 698 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FASTKD1Q53R41 847 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZNF648Q5T619 568 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DUPD1Q68J44 220 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CHST15Q7LFX5 561 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 GLRX5Q86SX6 157 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TMEM135Q86UB9 458 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CCNJLQ8IV13 435 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MPP5Q8N3R9 675 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FAM181AQ8N9Y4 354 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 LRRC39Q96DD0 335 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MFSD3Q96ES6 412 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CNDP2Q96KP4 475 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SIGLEC10Q96LC7 697 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CAMK1GQ96NX5 476 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TIMM29Q9BSF4 260 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 BOCQ9BWV1 1114 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DPH5Q9H2P9 285 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FAM96AQ9H5X1 160 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CAAP1Q9H8G2 361 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CATSPERZQ9NTU4 200 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MAD1L1Q9Y6D9 718 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 COL5A1P20908 1838 aaPredicted RBP11.51□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SPTBN4Q9H254 2564 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KLHL33A6NCF5 533 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 OR51F1A6NGY5 319 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ESPNB1AK53 854 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 QSOX1O00391 747 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TP73O15350 636 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KCNJ13O60928 360 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 USP1O94782 785 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TTC4O95801 387 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 POLBP06746 335 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PGAM1P18669 254 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CA5AP35218 305 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ACTR1BP42025 376 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 NSG1P42857 185 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 RPIAP49247 311 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DUSP3P51452 185 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CLCNKAP51800 687 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DRG2P55039 364 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ACTR1AP61163 376 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DAB2P98082 770 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DHX9Q08211 1270 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TCEA2Q15560 299 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DBN1Q16643 649 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 INSCQ1MX18 579 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 BBS9Q3SYG4 887 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ANKRD20A4Q4UJ75 823 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 BCL7AQ4VC05 210 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FNBP1LQ5T0N5 605 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PSAPL1Q6NUJ1 521 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CRTC3Q6UUV7 619 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PACS1Q6VY07 963 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 NRROSQ86YC3 692 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZNF547Q8IVP9 402 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PIANPQ8IYJ0 282 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 RASGEF1AQ8N9B8 481 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FAM46DQ8NEK8 389 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CCL4L1Q8NHW4 92 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 STAMBPL1Q96FJ0 436 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TAAR2Q9P1P5 351 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PRKAB1Q9Y478 270 aa11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PCYT1BQ9Y5K3 369 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP1-204ENST00000462122 OR2AG2A6NM03 316 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 F8W8V4 182 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PFDN6O15212 129 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CD3EAPO15446 510 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 AP2A2O94973 939 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 VAPBO95292 243 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PRSS56P0CW18 603 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CKMT1AP12532 417 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ACP5P13686 325 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ATP1B2P14415 290 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZNF7P17097 686 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CKMT2P17540 419 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 AK4P27144 223 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ARNTP27540 789 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ARCN1P48444 511 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TTPAP49638 278 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PRLHRP49683 370 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CDKN1CP49918 316 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CTSCP53634 463 aa11.49□□□□□ -0.57
TRAF3IP1-204ENST00000462122 B4GALNT1Q00973 533 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms