RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SFRP1Q8N474 314 aa22.85■■□□□ 1.25
CBX3-204ENST00000456948 WDR36Q8NI36 951 aaKnown RBP22.85■■□□□ 1.25
CBX3-204ENST00000456948 AHCYL2Q96HN2 611 aaKnown RBP22.85■■□□□ 1.25
CBX3-204ENST00000456948 SARS2Q9NP81 518 aaKnown RBP22.85■■□□□ 1.25
CBX3-204ENST00000456948 TRMT1Q9NXH9 659 aaKnown RBP22.85■■□□□ 1.25
CBX3-204ENST00000456948 AKAP7Q9P0M2 348 aaPredicted RBP22.85■■□□□ 1.25
CBX3-204ENST00000456948 TBC1D29Q9UFV1 150 aa22.85■■□□□ 1.25
CBX3-204ENST00000456948 FKBPLQ9UIM3 349 aa22.85■■□□□ 1.25
CBX3-204ENST00000456948 PCDHB1Q9Y5F3 818 aa22.85■■□□□ 1.25
CBX3-204ENST00000456948 SCN8AQ9UQD0 1980 aa22.85■■□□□ 1.25
CBX3-204ENST00000456948 TAF4O00268 1085 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 LDB2O43679 373 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 SUN1O94901 812 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 CPNE6O95741 557 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 APRTP07741 180 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 ZNF140P52738 457 aaPredicted RBP22.84■■□□□ 1.25
CBX3-204ENST00000456948 GABREP78334 506 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 GPLD1P80108 840 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 TMPRSS15P98073 1019 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 HHEXQ03014 270 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 MSLNQ13421 630 aaPredicted RBP22.84■■□□□ 1.25
CBX3-204ENST00000456948 SEMA5AQ13591 1074 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 PTPRCAPQ14761 206 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 POU6F1Q14863 301 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 NR1D2Q14995 579 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 SIX1Q15475 284 aaPredicted RBP22.84■■□□□ 1.25
CBX3-204ENST00000456948 AMZ1Q400G9 498 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 MAP9Q49MG5 647 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 SNX20Q7Z614 316 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 AMZ2Q86W34 360 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 SFTPA2Q8IWL1 248 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 TRIM48Q8IWZ4 208 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 SLC37A2Q8TED4 501 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 TMEM159Q96B96 161 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 ATXN7L3BQ96GX2 97 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 ZMYND15Q9H091 742 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 KCNK4Q9NYG8 393 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 TMPRSS11EQ9UL52 423 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 ENTPD2Q9Y5L3 495 aa22.84■■□□□ 1.25
CBX3-204ENST00000456948 TRBV23OR9-2A0A075B6M9 112 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 CCDC187A0A096LP49 1063 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 A0A1W2PQM1 296 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 PDZK1P1A8MUH7 402 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 CAPNS1P04632 268 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 HALP42357 657 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 OR1D5P58170 312 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 B4GALNT1Q00973 533 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 TMEM220Q6QAJ8 160 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 NLRP9Q7RTR0 991 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 OR13C4Q8NGS5 318 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 OR10G6Q8NH81 332 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 PATE1Q8WXA2 126 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 PDLIM2Q96JY6 352 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 NLE1Q9NVX2 485 aaPredicted RBP22.83■■□□□ 1.25
CBX3-204ENST00000456948 TTC7AQ9ULT0 858 aaPredicted RBP22.83■■□□□ 1.25
CBX3-204ENST00000456948 DNAJC16Q9Y2G8 782 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 KCTD3Q9Y597 815 aa22.83■■□□□ 1.25
CBX3-204ENST00000456948 PCYT1BQ9Y5K3 369 aaPredicted RBP22.83■■□□□ 1.25
CBX3-204ENST00000456948 GOLGA6L10A0A0M3HER8 536 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 HEATR9A2RTY3 570 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 PPM1DO15297 605 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 CCKBRP32239 447 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 MC4RP32245 332 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 MLLT3P42568 568 aaPredicted RBP22.82■■□□□ 1.24
CBX3-204ENST00000456948 PLA2G4EQ3MJ16 856 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 BEND7Q8N7W2 519 aaPredicted RBP22.82■■□□□ 1.24
CBX3-204ENST00000456948 OR52K1Q8NGK4 314 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 LIN37Q96GY3 246 aaPredicted RBP22.82■■□□□ 1.24
CBX3-204ENST00000456948 ZNF578Q96N58 590 aaPredicted RBP22.82■■□□□ 1.24
CBX3-204ENST00000456948 TTC1Q99614 292 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 COPS8Q99627 209 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 KCNF1Q9H3M0 494 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 EPB41L1Q9H4G0 881 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 EPB41L5Q9HCM4 733 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 PRDM8Q9NQV8 689 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 DMXL2Q8TDJ6 3036 aa22.82■■□□□ 1.24
CBX3-204ENST00000456948 H7C0S8 307 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 GAPDHSO14556 408 aaPredicted RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 B4GAT1O43505 415 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 BRINP1O60477 761 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 POP7O75817 140 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 VIPP01282 170 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 MPOP05164 745 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 ETS1P14921 441 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 RPL22P35268 128 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 BASP1P80723 227 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 SARNPP82979 210 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 KHDC1Q4VXA5 237 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 ZRANB3Q5FWF4 1079 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 C3orf38Q5JPI3 329 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 WASH2PQ6VEQ5 465 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 ZNF547Q8IVP9 402 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 SLC35F6Q8N357 371 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 RASGEF1CQ8N431 466 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 RASGEF1AQ8N9B8 481 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 FGF11Q92914 225 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.81■■□□□ 1.24
CBX3-204ENST00000456948 MAGOHBQ96A72 148 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 DNAJC1Q96KC8 554 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 VPS37BQ9H9H4 285 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms