RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 KIAA0930Q6ICG6 404 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-205ENST00000456754 DENND6AQ8IWF6 608 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 C9orf72Q96LT7 481 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-205ENST00000456754 ZC3H7BQ9UGR2 993 aaKnown RBP13.89□□□□□ -0.19
TIMP1-205ENST00000456754 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 DGKBQ9Y6T7 804 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 PIEZO1Q92508 2521 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 SMAPO00193 183 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 TRIM38O00635 465 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 TNFRSF10CO14798 259 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 CD3EAPO15446 510 aaKnown RBP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 GRID2O43424 1007 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 NUAK1O60285 661 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 CDK14O94921 469 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 EML2O95834 649 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 TNFP01375 233 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 MYBL2P10244 700 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 ACP5P13686 325 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 MSH3P20585 1137 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 KELP23276 732 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 PBLDP30039 288 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 ABCG1P45844 678 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 CTBSQ01459 385 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 CTBP1Q13363 440 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 LAMB3Q13751 1172 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 LDLRAP1Q5SW96 308 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 STEAP4Q687X5 459 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 TMEM220Q6QAJ8 160 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 XKR5Q6UX68 686 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 NAPRTQ6XQN6 538 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 CHST15Q7LFX5 561 aaPredicted RBP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 C11orf96Q7Z7L8 435 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 OTUD6BQ8N6M0 293 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
TIMP1-205ENST00000456754 PEX13Q92968 403 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 OR2M4Q96R27 311 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 C19orf43Q9BQ61 176 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 SLC13A1Q9BZW2 595 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 ANKZF1Q9H8Y5 726 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 FAM114A2Q9NRY5 505 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 ZDHHC3Q9NYG2 299 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 VPS18Q9P253 973 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 FAM8A1Q9UBU6 413 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 NFU1Q9UMS0 254 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 KCNK6Q9Y257 313 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
TIMP1-205ENST00000456754 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 IGLV3-16A0A075B6K0 115 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 MAGEB16A2A368 324 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 CHUKO15111 745 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 AQP9O43315 295 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SH3BP5O60239 455 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SSTR1P30872 391 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 GPX6P59796 221 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 MPP1Q00013 466 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 NAA30Q147X3 362 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 LONRF1Q17RB8 773 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 FAM153CQ494X1 144 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 GPR33Q49SQ1 333 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 HSP90AA5PQ58FG0 334 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 NEPROQ6NW34 567 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SLC30A9Q6PML9 568 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 FAM83HQ6ZRV2 1179 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 CENPUQ71F23 418 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 GALNT13Q8IUC8 556 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 TRAPPC5Q8IUR0 188 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 LILRA3Q8N6C8 439 aaPredicted RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 EID2Q8N6I1 236 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 LKAAEAR1Q8TD35 194 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 COPS8Q99627 209 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SMYD2Q9NRG4 433 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 IARS2Q9NSE4 1012 aaKnown RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 SPATS2LQ9NUQ6 558 aaKnown RBP13.87□□□□□ -0.19
TIMP1-205ENST00000456754 DNAJC16Q9Y2G8 782 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 DMXL1Q9Y485 3027 aa13.87□□□□□ -0.19
TIMP1-205ENST00000456754 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 CASC3O15234 703 aaKnown RBP13.86□□□□□ -0.19
TIMP1-205ENST00000456754 YY2O15391 372 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 VEGFDO43915 354 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 PCDHGA12O60330 932 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 POLBP06746 335 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 CTSEP14091 401 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 ITGB6P18564 788 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 SLC1A2P43004 574 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 MAGEA4P43358 317 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 HNRNPKP61978 463 aaKnown RBP eCLIP13.86□□□□□ -0.199e-6■■■□□ 18.9
TIMP1-205ENST00000456754 CAV1Q03135 178 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 KCNMB4Q86W47 210 aa13.86□□□□□ -0.19
TIMP1-205ENST00000456754 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms