RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CERS2Q96G23 380 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 DCUN1D1Q96GG9 259 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 TCF12Q99081 682 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 TCEAL2Q9H3H9 227 aaPredicted RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 RXFP3Q9NSD7 469 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 TRNAU1APQ9NX07 287 aaKnown RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 MOCS1Q9NZB8 636 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 IL1RAPL1Q9NZN1 696 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 APOBEC3BQ9UH17 382 aaKnown RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 PLXNB3Q9ULL4 1909 aa17.64■□□□□ 0.42
FAM239A-203ENST00000456563 GRID2O43424 1007 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 PIAS2O75928 621 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 ATP1B2P14415 290 aaPredicted RBP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 EPHA8P29322 1005 aaPredicted RBP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 NSG1P42857 185 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 GNPDA1P46926 289 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 HSP90AA5PQ58FG0 334 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 CYS1Q717R9 158 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 GALNT13Q8IUC8 556 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 CILP2Q8IUL8 1156 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 PNPLA1Q8N8W4 532 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 GABPB2Q8TAK5 448 aaPredicted RBP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF514Q96K75 400 aaPredicted RBP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 OR2M4Q96R27 311 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 FAM167BQ9BTA0 163 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 BOCQ9BWV1 1114 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 CAAP1Q9H8G2 361 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 TM7SF3Q9NS93 570 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 SPASTQ9UBP0 616 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 GPR34Q9UPC5 381 aa17.64■□□□□ 0.41
FAM239A-203ENST00000456563 PCYT1BQ9Y5K3 369 aaPredicted RBP17.64■□□□□ 0.41
FAM239A-203ENST00000456563 PFDN6O15212 129 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SGTAO43765 313 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 PCDHGA12O60330 932 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ERVK-10P10266 1014 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CTSEP14091 401 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF7P17097 686 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 DGKAP23743 735 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 PMLP29590 882 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SSTR1P30872 391 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CTSCP53634 463 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 GPX6P59796 221 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 BNIP3Q12983 259 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SLMAPQ14BN4 828 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SMAD1Q15797 465 aaKnown RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ERCC6LQ2NKX8 1250 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 BCL7AQ4VC05 210 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 PRRT3Q5FWE3 981 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 RNF187Q5TA31 235 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF470Q6ECI4 717 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF449Q6P9G9 518 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 TRMT10BQ6PF06 316 aaKnown RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 TMEM220Q6QAJ8 160 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 C3orf62Q6ZUJ4 267 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 KANSL1Q7Z3B3 1105 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 LDB1Q86U70 411 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 LRRTM4Q86VH4 590 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF547Q8IVP9 402 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CNTN4Q8IWV2 1026 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SDR16C5Q8N3Y7 309 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 FSTL5Q8N475 847 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 OTUD6BQ8N6M0 293 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 SAP25Q8TEE9 199 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CCDC97Q96F63 343 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 LRRC61Q9BV99 259 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 TMEM168Q9H0V1 697 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 LRRC4CQ9HCJ2 640 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 PCDHGB2Q9Y5G2 931 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 DNMT3AQ9Y6K1 912 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 CSNK1G3Q9Y6M4 447 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
FAM239A-203ENST00000456563 KNL1Q8NG31 2342 aa17.63■□□□□ 0.41
FAM239A-203ENST00000456563 KMOO15229 486 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 OR1I1O60431 355 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 NDUFS3O75489 264 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 SPAG6O75602 509 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 AP2A2O94973 939 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 MYBL2P10244 700 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 IL9RQ01113 521 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 MGAT5Q09328 741 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 SLC14A1Q13336 389 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 WDR93Q6P2C0 686 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 DBX2Q6ZNG2 339 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 TRAPPC5Q8IUR0 188 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 ZNF548Q8NEK5 533 aaPredicted RBP17.62■□□□□ 0.41
FAM239A-203ENST00000456563 GPBAR1Q8TDU6 330 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 SGF29Q96ES7 293 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 CLPBQ9H078 707 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 IARS2Q9NSE4 1012 aaKnown RBP17.62■□□□□ 0.41
FAM239A-203ENST00000456563 INTS10Q9NVR2 710 aaKnown RBP17.62■□□□□ 0.41
FAM239A-203ENST00000456563 FBXO5Q9UKT4 447 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 VPS9D1Q9Y2B5 631 aa17.62■□□□□ 0.41
FAM239A-203ENST00000456563 PRKAB1Q9Y478 270 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms