RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 PCBP2Q15366 365 aaKnown RBP eCLIP14.91□□□□□ -0.028e-6■■■■□ 24
LDLR-202ENST00000455727 MAP7D1Q3KQU3 841 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 VPS26BQ4G0F5 336 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 MPP7Q5T2T1 576 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 METTL3Q86U44 580 aaKnown RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 DHFR2Q86XF0 187 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 GPR65Q8IYL9 337 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 CHCHD4Q8N4Q1 142 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 WFDC5Q8TCV5 224 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 GBP5Q96PP8 586 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 EFHD1Q9BUP0 239 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 BRINP2Q9C0B6 783 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 TIMM22Q9Y584 194 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 TNPO3Q9Y5L0 923 aaKnown RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 CPQQ9Y646 472 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 LTBP2Q14767 1821 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 A0A1W2PP18 115 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 SOCS5O75159 536 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 ZNF7P17097 686 aaPredicted RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 PRDX3P30048 256 aaKnown RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 ECT2LQ008S8 904 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 FOXB2Q5VYV0 432 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 ADAMTSL2Q86TH1 951 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 GOLM1Q8NBJ4 401 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 SLCO4A1Q96BD0 722 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 VWCEQ96DN2 955 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 RIC8BQ9NVN3 520 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 LSM7Q9UK45 103 aaKnown RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
LDLR-202ENST00000455727 ZNF510Q9Y2H8 683 aa14.91□□□□□ -0.02
LDLR-202ENST00000455727 FXYD1O00168 92 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 LAG3P18627 525 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 TLE2Q04725 743 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 RCAN2Q14206 197 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 RBBP7Q16576 425 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 FBXO48Q5FWF7 155 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 LYPLAL1Q5VWZ2 237 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 TXNDC8Q6A555 127 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 HTR3DQ70Z44 454 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 CAMK1DQ8IU85 385 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 CPXM2Q8N436 756 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 LRRC58Q96CX6 371 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 SLC39A3Q9BRY0 314 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 RC3H2Q9HBD1 1191 aaKnown RBP14.9□□□□□ -0.02
LDLR-202ENST00000455727 ZFYVE1Q9HBF4 777 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
LDLR-202ENST00000455727 ARMC1Q9NVT9 282 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 APPL1Q9UKG1 709 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 TRIM17Q9Y577 477 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 ST14Q9Y5Y6 855 aa14.9□□□□□ -0.02
LDLR-202ENST00000455727 A0A0U1RQS6 177 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 CXorf51AA0A1B0GTR3 108 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 K7ERQ8 282 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 NME4O00746 187 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TRBC1P01850 177 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 ZNF26P17031 533 aaPredicted RBP14.89□□□□□ -0.03
LDLR-202ENST00000455727 CTPS1P17812 591 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 DIO3P55073 304 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 NME5P56597 212 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 ERVK-8P63133 956 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 BCL2L1Q07817 233 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 BNIP2Q12982 314 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 PDCD4Q53EL6 469 aaKnown RBP14.89□□□□□ -0.03
LDLR-202ENST00000455727 SNX20Q7Z614 316 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 SLC15A3Q8IY34 581 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 RBFAQ8N0V3 343 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 OR2T34Q8NGX1 318 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 OR2T3Q8NH03 318 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 CLPBQ9H078 707 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 SARS2Q9NP81 518 aaKnown RBP14.89□□□□□ -0.03
LDLR-202ENST00000455727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.89□□□□□ -0.03
LDLR-202ENST00000455727 EIF2B4Q9UI10 523 aaKnown RBP14.89□□□□□ -0.03
LDLR-202ENST00000455727 AP4B1Q9Y6B7 739 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TRBV5-4A0A0C4DH59 114 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 ABHD14A-ACY1A0A1B0GW23 586 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 AQP12BA6NM10 295 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 IQCF5A8MTL0 148 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 GAPDHSO14556 408 aaPredicted RBP14.89□□□□□ -0.03
LDLR-202ENST00000455727 ALPIP09923 528 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 SLC6A2P23975 617 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 CDKN3Q16667 212 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 SBSNQ6UWP8 590 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 SERPINA9Q86WD7 417 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 AQP12AQ8IXF9 295 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TSC22D3Q99576 134 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 CENPKQ9BS16 269 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TRIM54Q9BYV2 358 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TM6SF2Q9BZW4 377 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 TRIM15Q9C019 465 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 ZIM2Q9NZV7 527 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 GNPTGQ9UJJ9 305 aa14.89□□□□□ -0.03
LDLR-202ENST00000455727 C15orf38-AP3S2A0A0A6YYH1 394 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 SCAMP3O14828 347 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 SMAD6O43541 496 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 PRAMEF1O95521 474 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms