RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RNF224P0DH78 156 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SRCP12931 536 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PDGFRAP16234 1089 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 TSHRP16473 764 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SLC9A1P19634 815 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CHRNA3P32297 505 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 KIR2DL3P43628 341 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 RECQLP46063 649 aaPredicted RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 RABIFP47224 123 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 RPL34P49207 117 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 ADKP55263 362 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 SLC8A3P57103 927 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 RPS21P63220 83 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 CCL7P80098 99 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 AMPD3Q01432 767 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PPP3CAQ08209 521 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 ADCY2Q08462 1091 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CCDC15Q0P6D6 951 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 BST2Q10589 180 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 STK4Q13043 487 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 C1orf61Q13536 156 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PDE1CQ14123 709 aaPredicted RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 SLC39A14Q15043 492 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 NFIL3Q16649 462 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 DCAF17Q5H9S7 520 aaPredicted RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 RABL3Q5HYI8 236 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 RNF219Q5W0B1 726 aaPredicted RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 CAPRIN2Q6IMN6 1127 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 KIAA1161Q6NSJ0 714 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PMF1Q6P1K2 205 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 LVRNQ6Q4G3 990 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 ERN2Q76MJ5 926 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 RHOUQ7L0Q8 258 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 BEND5Q7L4P6 421 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 ZSCAN30Q86W11 494 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PHYKPLQ8IUZ5 450 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CMTM4Q8IZR5 234 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 RBFAQ8N0V3 343 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CCAR2Q8N163 923 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 SDR16C5Q8N3Y7 309 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SH2D3CQ8N5H7 860 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PDILTQ8N807 584 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 ARL10Q8N8L6 244 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 DENND6BQ8NEG7 585 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 OR52K2Q8NGK3 314 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 LMX1AQ8TE12 382 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 DQX1Q8TE96 717 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 SSC4DQ8WTU2 575 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SEMA4DQ92854 862 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 USP7Q93009 1102 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 VOPP1Q96AW1 172 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 ARL8AQ96BM9 186 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CENPTQ96BT3 561 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 TMX3Q96JJ7 454 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 FEM1CQ96JP0 617 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PPP1R13BQ96KQ4 1090 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 HSFY1Q96LI6 401 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SERPINB11Q96P15 392 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CATSPER2Q96P56 530 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 GFM1Q96RP9 751 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 CMKLR1Q99788 373 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PRMT1Q99873 361 aaKnown RBP3.73□□□□□ -1.81
RBM39-220ENST00000455343 FEM1AQ9BSK4 669 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 LRRC61Q9BV99 259 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 IMPG2Q9BZV3 1241 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SPRY4Q9C004 299 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 DNAI2Q9GZS0 605 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 LRRN3Q9H3W5 708 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 LRRC4Q9HBW1 653 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 EPB41L5Q9HCM4 733 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CISHQ9NSE2 258 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SPASTQ9UBP0 616 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 PISDQ9UG56 409 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 APPL1Q9UKG1 709 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 TRAF3IP3Q9Y228 551 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 TBC1D30Q9Y2I9 924 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 CEP83Q9Y592 693 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 SPO11Q9Y5K1 396 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 FADS3Q9Y5Q0 445 aa3.73□□□□□ -1.81
RBM39-220ENST00000455343 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 ICE1Q9Y2F5 2266 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 C2CD3Q4AC94 2353 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 A0A0A6YYK5 440 aaPredicted RBP3.72□□□□□ -1.81
RBM39-220ENST00000455343 KCNU1A8MYU2 1149 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 STMND1H3BQB6 276 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 KPNA3O00505 521 aaPredicted RBP3.72□□□□□ -1.81
RBM39-220ENST00000455343 TOR1BO14657 336 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 FPGTO14772 594 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 KLRC4O43908 158 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 MFAP3LO75121 409 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 PCDH8O95206 1070 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 NR3C1P04150 777 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 RPLP0P05388 317 aaKnown RBP3.72□□□□□ -1.81
RBM39-220ENST00000455343 ANXA6P08133 673 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 SETSIPP0DME0 302 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 VDRP11473 427 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 ADRB3P13945 408 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 LIFP15018 202 aa3.72□□□□□ -1.81
RBM39-220ENST00000455343 ELAVL4P26378 380 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms