RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SLC25A23Q9BV35 468 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF624Q9P2J8 865 aaPredicted RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 RARRES3Q9UL19 164 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF451Q9Y4E5 1061 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 NBPF19A0A087WUL8 3843 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 A0A0U1RQS6 177 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 PDZK1P1A8MUH7 402 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF7P17097 686 aaPredicted RBP14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 TYRP1P17643 537 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 IDSP22304 550 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC19A1P41440 591 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 SEPHS1P49903 392 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 DSC2Q02487 901 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 TUBB3Q13509 450 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 KRT81Q14533 505 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 CHRNA6Q15825 494 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ASIC2Q16515 512 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 CCDC183Q5T5S1 534 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 APTXQ7Z2E3 356 aaKnown RBP14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 GLYATL1Q969I3 302 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 CXorf40BQ96DE9 158 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ISCUQ9H1K1 167 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 OR2AG1Q9H205 316 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ZFYVE1Q9HBF4 777 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ACSS2Q9NR19 701 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 ANO10Q9NW15 660 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 RBM22Q9NW64 420 aaKnown RBP eCLIP14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC30A1Q9Y6M5 507 aa14.05□□□□□ -0.16
LYSMD3-202ENST00000453259 SSU72P8A0A1W2PR75 194 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 LRRC53A6NM62 1247 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 DPM1O60762 260 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 CPNE3O75131 537 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 CEACAM4O75871 244 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 JCHAINP01591 159 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 PDGFAP04085 211 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 HALP42357 657 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 LEPRP48357 1165 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC25A11Q02978 314 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 GPR18Q14330 331 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 QPCTQ16769 361 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 HADHQ16836 314 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 TDRD12Q587J7 1177 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF517Q6ZMY9 492 aaPredicted RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 SIDT2Q8NBJ9 832 aaKnown RBP14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 LRFN5Q96NI6 719 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 VPS35Q96QK1 796 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF670Q9BS34 389 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 HAUS4Q9H6D7 363 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 MAGEE1Q9HCI5 957 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 TTLL3Q9Y4R7 772 aa14.04□□□□□ -0.16
LYSMD3-202ENST00000453259 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 MFSD11O43934 449 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 IL4RP24394 825 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC14A2Q15849 920 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 IZUMO3Q5VZ72 239 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 MAMDC2Q7Z304 686 aaPredicted RBP14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF571Q7Z3V5 609 aaPredicted RBP14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 ADGRG6Q86SQ4 1221 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 TMEM135Q86UB9 458 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 DTX3LQ8TDB6 740 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 RSC1A1Q92681 617 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 HDAC11Q96DB2 347 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF514Q96K75 400 aaPredicted RBP14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 SMIM14Q96QK8 99 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 TRIM55Q9BYV6 548 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 ING2Q9H160 280 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 LATS2Q9NRM7 1088 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 SCHIP1Q9P0W5 487 aaPredicted RBP14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 LCMT1Q9UIC8 334 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 DOPEY1Q5JWR5 2465 aa14.03□□□□□ -0.16
LYSMD3-202ENST00000453259 WIPF3A6NGB9 483 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 TLCD2A6NGC4 264 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 DNAJB5O75953 348 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 CDK14O94921 469 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 HLA-DQB2P05538 268 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 BRAFP15056 766 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 TCF4P15884 667 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 FECHP22830 423 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 GSDMDP57764 484 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 TUBB4BP68371 445 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 HSD11B2P80365 405 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 DMPKQ09013 629 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 KLHL30Q0D2K2 578 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 LAMB3Q13751 1172 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 TUBB2AQ13885 445 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 IHHQ14623 411 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 PDK2Q15119 407 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 STX1AQ16623 288 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 NCBP2-AS2Q69YL0 99 aa14.02□□□□□ -0.17
LYSMD3-202ENST00000453259 PWWP2BQ6NUJ5 590 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms