RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PRKAB1Q9Y478 270 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 TCRBV7S3A2A0A539 114 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 EME2A4GXA9 379 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-202ENST00000452372 GPR39O43194 453 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 MTX2O75431 263 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 ECEL1O95672 775 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 NPY2RP49146 381 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 KCNJ11Q14654 390 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 CCDC38Q502W7 563 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 HES3Q5TGS1 186 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 SLC30A9Q6PML9 568 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 SYT10Q6XYQ8 523 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 CHST15Q7LFX5 561 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-202ENST00000452372 NLRP9Q7RTR0 991 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 SNX20Q7Z614 316 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 GPR156Q8NFN8 814 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 SIRPGQ9P1W8 387 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 PADI4Q9UM07 663 aa19.69■□□□□ 0.74
COL9A3-202ENST00000452372 RP1P56715 2156 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 A0A087WV48 116 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 CCL22O00626 93 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 NOBOXO60393 691 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 GP1BAP07359 652 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 MC4RP32245 332 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 ACTR1BP42025 376 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 ACTR1AP61163 376 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 SARNPP82979 210 aaKnown RBP19.68■□□□□ 0.74
COL9A3-202ENST00000452372 E2F1Q01094 437 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 INSM1Q01101 510 aaPredicted RBP19.68■□□□□ 0.74
COL9A3-202ENST00000452372 PPP1R7Q15435 360 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 GPR33Q49SQ1 333 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 LRRC8BQ6P9F7 803 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 PDZD3Q86UT5 571 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 LRRTM4Q86VH4 590 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 CACTIN-AS1Q8N1I8 211 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 KYQ8NBH2 561 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 CPT1BQ92523 772 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 TTC25Q96NG3 672 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 ZCCHC2Q9C0B9 1178 aaKnown RBP19.68■□□□□ 0.74
COL9A3-202ENST00000452372 IL22Q9GZX6 179 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 BFARQ9NZS9 450 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 SLC30A1Q9Y6M5 507 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 PTPRQQ9UMZ3 2332 aa19.68■□□□□ 0.74
COL9A3-202ENST00000452372 CPED1A4D0V7 1026 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 CCDC188H7C350 402 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 KMOO15229 486 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 ITGALP20701 1170 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 PTGIRP43119 386 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 TERF1P54274 439 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 SESN2P58004 480 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-202ENST00000452372 GTF2H3Q13889 308 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 PCID2Q5JVF3 399 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 TSTD2Q5T7W7 516 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 GUSBP11Q6P575 273 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 ZNF534Q76KX8 674 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 EFL1Q7Z2Z2 1120 aaKnown RBP19.67■□□□□ 0.74
COL9A3-202ENST00000452372 C17orf82Q86X59 251 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-202ENST00000452372 OR6C4Q8NGE1 309 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 IFI44Q8TCB0 444 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 ZDHHC1Q8WTX9 485 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 PEX13Q92968 403 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 NAT6Q93015 286 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 ULK4Q96C45 1275 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 RUNDC3BQ96NL0 473 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 CRLS1Q9UJA2 301 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 TCAF1Q9Y4C2 921 aa19.67■□□□□ 0.74
COL9A3-202ENST00000452372 CCDC78A2IDD5 438 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 B4DGG1 531 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ACP5P13686 325 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ARSDP51689 593 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 CLCNKAP51800 687 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ACVR1Q04771 509 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 RTP5Q14D33 572 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 C14orf28Q4W4Y0 310 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ANKRD22Q5VYY1 191 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ZNF547Q8IVP9 402 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 SFTPA2Q8IWL1 248 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 KLHL7Q8IXQ5 586 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 NXPE1Q8N323 547 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 RASGEF1AQ8N9B8 481 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 MCUQ8NE86 351 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 PPHLN1Q8NEY8 458 aaKnown RBP19.66■□□□□ 0.74
COL9A3-202ENST00000452372 OR13J1Q8NGT2 312 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 ZNF778Q96MU6 729 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 FAM96AQ9H5X1 160 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.66■□□□□ 0.74
COL9A3-202ENST00000452372 SLC23A2Q9UGH3 650 aa19.66■□□□□ 0.74
COL9A3-202ENST00000452372 TRBV5-4A0A0C4DH59 114 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 TLX3O43711 291 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-202ENST00000452372 MLNP12872 115 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 ZNF7P17097 686 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-202ENST00000452372 MSH3P20585 1137 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 AKT1P31749 480 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 CACNG1Q06432 222 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 PTK6Q13882 451 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 SOWAHCQ53LP3 525 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-202ENST00000452372 ZRANB3Q5FWF4 1079 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 PERM1Q5SV97 790 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 CRTC3Q6UUV7 619 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 SYDE1Q6ZW31 735 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms