RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ETFBKMTQ8IXQ9 262 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 RHEBL1Q8TAI7 183 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 STMN2Q93045 179 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ZNF570Q96NI8 536 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TRMOQ9BU70 441 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 MARK1Q9P0L2 795 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 STX18Q9P2W9 335 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 FKBPLQ9UIM3 349 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 MRPS17Q9Y2R5 130 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 UBA6A0AVT1 1052 aaPredicted RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 TYW5A2RUC4 315 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 RGSL1A5PLK6 1076 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 ANTXRLA6NF34 631 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 UBFD1O14562 309 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 THRAP10827 490 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 CDKN1CP49918 316 aaPredicted RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 RHOAP61586 193 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 CDH18Q13634 790 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 PTPRRQ15256 657 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 TMEM196Q5HYL7 178 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 ATXN7L2Q5T6C5 722 aaPredicted RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 C6orf163Q5TEZ5 329 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 SNX32Q86XE0 403 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 PIANPQ8IYJ0 282 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 PELI3Q8N2H9 469 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 DDI1Q8WTU0 396 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 EZH1Q92800 747 aaPredicted RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 ATOH8Q96SQ7 321 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 TFB2MQ9H5Q4 396 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 MEAF6Q9HAF1 191 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 HACD3Q9P035 362 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 STOML1Q9UBI4 398 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 CLEC4EQ9ULY5 219 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 H7C0S8 307 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 SMIM24O75264 130 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 TULP3O75386 442 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 NDUFS3O75489 264 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 MT-CO1P00395 513 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 EGFP01133 1207 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 CHRNB1P11230 501 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 MTHFD2P13995 350 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 FMO4P31512 558 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 MC4RP32245 332 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 INHBCP55103 352 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 HERVK_113P63132 956 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 SLC34A1Q06495 639 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 CCINQ13939 588 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 C1orf146Q5VVC0 180 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 NXNQ6DKJ4 435 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 PSAPL1Q6NUJ1 521 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 CHSY3Q70JA7 882 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 DEFB107AQ8IZN7 70 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 RP9Q8TA86 221 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 NRG4Q8WWG1 115 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 BIRC8Q96P09 236 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 NELL2Q99435 816 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 ERVK-6Q9BXR3 956 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 DERL2Q9GZP9 239 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 LMAN1LQ9HAT1 526 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 ZBTB26Q9HCK0 441 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 G3BP2Q9UN86 482 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 LRRC42Q9Y546 428 aa10.62□□□□□ -0.71
PKP4-206ENST00000452162 COPG1Q9Y678 874 aaKnown RBP10.62□□□□□ -0.71
PKP4-206ENST00000452162 SRP72O76094 671 aaKnown RBP10.61□□□□□ -0.71
PKP4-206ENST00000452162 AVPR2P30518 371 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 AP1S1P61966 158 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 PAQR3Q6TCH7 311 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 MFN1Q8IWA4 741 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 APCDD1Q8J025 514 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 AFAP1L2Q8N4X5 818 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
PKP4-206ENST00000452162 CEP70Q8NHQ1 597 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 KIAA1191Q96A73 305 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 FAM136AQ96C01 138 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 MARK4Q96L34 752 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 OSBPL6Q9BZF3 934 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 SYTL2Q9HCH5 934 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 TAS2R13Q9NYV9 303 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 DLGAP2Q9P1A6 1054 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 IKZF3Q9UKT9 509 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 CACNA1HO95180 2353 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 VPS13AQ96RL7 3174 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 CCDC189A1A4V9 331 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 K7ERQ8 282 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 UBXN8O00124 270 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 STX7O15400 261 aaKnown RBP10.61□□□□□ -0.71
PKP4-206ENST00000452162 KERAO60938 352 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
PKP4-206ENST00000452162 PDE5AO76074 875 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 CYBBP04839 570 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 CD9P21926 228 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 TTPAP49638 278 aa10.61□□□□□ -0.71
PKP4-206ENST00000452162 XIAPP98170 497 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms