RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HEATR6Q6AI08 1181 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TXNDC11Q6PKC3 985 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 AMIGO1Q86WK6 493 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PTRH1Q86Y79 214 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 MICU2Q8IYU8 434 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GLB1L3Q8NCI6 653 aaPredicted RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 NSUN6Q8TEA1 469 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 KCTD4Q8WVF5 259 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 BSNDQ8WZ55 320 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ELMO1Q92556 727 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TOE1Q96GM8 510 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 VPS39Q96JC1 886 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TINF2Q9BSI4 451 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 RAB6CQ9H0N0 254 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZNF556Q9HAH1 456 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 CISHQ9NSE2 258 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GLTPQ9NZD2 209 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ERVK-18Q9QC07 812 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 MKLN1Q9UL63 735 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 RUVBL2Q9Y230 463 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZFC3H1O60293 1989 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 MEIOCA2RUB1 952 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 CLDN24A6NM45 220 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 UBXN8O00124 270 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PRSS23O95084 383 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PDGFAP04085 211 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 CD36P16671 472 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 SAT1P21673 171 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GPX3P22352 226 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ERP29P30040 261 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 CD6P30203 668 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TALDO1P37837 337 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ATP4BP51164 291 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZNF143P52747 638 aaPredicted RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 ARPP19P56211 112 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 SMARCB1Q12824 385 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 SLAMF1Q13291 335 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 KCNAB2Q13303 367 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 KIF19Q2TAC6 998 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PLEKHG6Q3KR16 790 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 XKR9Q5GH70 373 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 DENND5AQ6IQ26 1287 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 BRSK2Q8IWQ3 736 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 AMER2Q8N7J2 671 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 OR10Z1Q8NGY1 313 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 SLC7A6Q92536 515 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZNF566Q969W8 418 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 LRRC58Q96CX6 371 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PGLYRP2Q96PD5 576 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 NEDD4LQ96PU5 975 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 APOL4Q9BPW4 351 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 RBCK1Q9BYM8 510 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 EHMT1Q9H9B1 1298 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 EXD2Q9NVH0 621 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GPATCH2LQ9NWQ4 482 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TNFRSF10DQ9UBN6 386 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 EIF3KQ9UBQ5 218 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 KCNH4Q9UQ05 1017 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PCDHA9Q9Y5H5 950 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GREB1LQ9C091 1923 aaPredicted RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 RGPD3A6NKT7 1758 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 RGPD4Q7Z3J3 1758 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 PNMA8CA0A1B0GUJ8 204 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 G3V2T6 193 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 H3BQ06 376 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 NFIBO00712 420 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 LYPLA2O95372 231 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 MT-CO1P00395 513 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CYP2A6P11509 494 aaPredicted RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 STMN1P16949 149 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CHRM3P20309 590 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CAPN3P20807 821 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 UGT2B10P36537 528 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CBX5P45973 191 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 MMP16P51512 607 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 MAPK12P53778 367 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 GBE1Q04446 702 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 FOXM1Q08050 763 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 FAPQ12884 760 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 CDO1Q16878 200 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 UGT3A2Q3SY77 523 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 SPANXN2Q5MJ10 180 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 TSTD2Q5T7W7 516 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 SHEQ5VZ18 495 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 GLYATQ6IB77 296 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 EFL1Q7Z2Z2 1120 aaKnown RBP8.54□□□□□ -1.04
LSM5-208ENST00000450169 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 RIMKLAQ8IXN7 391 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 GALNT11Q8NCW6 608 aa8.54□□□□□ -1.04
LSM5-208ENST00000450169 OR4M1Q8NGD0 313 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms